C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chemokine (C-C motif) receptor 6a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000087474 ccr6a 7955 + 20:30636455-30640427 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000122256 ccr6a-001 30636455-30640427 protein_coding
  ENSDART00000157305 ccr6a-201 30639273-30640427 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000122256ENSDART00000157305
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000122256 0.227±0.14 0.642±0.00 0.920±0.00 N/A N/A
ENSDART00000157305 0.882±0.00 1.522±0.00 0.167±0.00 0.151±0.00 0.267±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002HA CIL_0002HA_0001 CGP 20:30604875-30640427

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0004950 IEA chemokine receptor activity
GO:0006935 IEA chemotaxis
GO:0006955 IEA immune response
GO:0007165 IEA signal transduction
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016493 IEA C-C chemokine receptor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000112486 CCR6 chemokine (C-C motif) receptor 6 protein_coding Homo_sapiens
ENSG00000272980 CCR6 chemokine (C-C motif) receptor 6 protein_coding Homo_sapiens
ENSMUSG00000040899 Ccr6 chemokine (C-C motif) receptor 6 protein_coding Mus_musculus

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