C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002HA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000003058-ENSDARG00000087474 CGP 7955 20:30604875-30640427
GeneTranscriptPositionBiotype
ENSDARG00000003058 (fgfr1op)
FGFR1 oncogene partner 		ENSDART00000010494 (fgfr1op-001) 30604875-30636078 protein_coding
ENSDART00000131422 (fgfr1op-002) 30604875-30609175 retained_intron
ENSDART00000137007 (fgfr1op-003) 30604921-30605599 processed_transcript
ENSDART00000153066 (fgfr1op-004) 30622453-30636051 protein_coding
ENSDARG00000087474 (ccr6a)
chemokine (C-C motif) receptor 6a 		ENSDART00000122256 (ccr6a-001) 30636455-30640427 protein_coding
ENSDART00000157305 (ccr6a-201) 30639273-30640427 protein_coding
CIL_0002HA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000213066-ENSG00000272980 CGP 9606 6:166999182-167139141
GeneTranscriptPositionBiotype
ENSG00000213066 (FGFR1OP)
FGFR1 oncogene partner 		ENST00000349556 (FGFR1OP-002) 166999408-167040317 protein_coding
ENST00000366847 (FGFR1OP-001) 166999182-167052713 protein_coding
ENST00000476078 (FGFR1OP-004) 166999617-167004304 processed_transcript
ENST00000488525 (FGFR1OP-006) 167024790-167033882 processed_transcript
ENST00000494781 (FGFR1OP-003) 166999457-167011691 processed_transcript
ENST00000496181 (FGFR1OP-005) 167022426-167025211 processed_transcript
ENST00000622353 (FGFR1OP-201) 166999317-167042418 protein_coding
ENSG00000272980 (CCR6)
chemokine (C-C motif) receptor 6 		ENST00000400926 (CCR6-201) 167111807-167139141 protein_coding
ENST00000609590 (CCR6-001) 166999405-167139141 retained_intron
CIL_0002HA_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000069135-ENSMUSG00000040899 CGP 10090 17:8165501-8257127
GeneTranscriptPositionBiotype
ENSMUSG00000040899 (Ccr6)
chemokine (C-C motif) receptor 6 		ENSMUST00000097418 (Ccr6-201) 8242526-8257127 protein_coding
ENSMUST00000164411 (Ccr6-202) 8236043-8257127 protein_coding
ENSMUST00000166348 (Ccr6-203) 8243807-8257127 protein_coding
ENSMUST00000167956 (Ccr6-204) 8243807-8257127 protein_coding
ENSMUST00000177568 (Ccr6-205) 8243807-8257127 protein_coding
ENSMUST00000180103 (Ccr6-206) 8243807-8257127 protein_coding
ENSMUSG00000069135 (Fgfr1op)
Fgfr1 oncogene partner 		ENSMUST00000024636 (Fgfr1op-002) 8165540-8196475 protein_coding
ENSMUST00000097419 (Fgfr1op-001) 8165501-8196804 protein_coding
ENSMUST00000161898 (Fgfr1op-004) 8182247-8194945 protein_coding
ENSMUST00000162586 (Fgfr1op-003) 8165520-8176081 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002HA_0001ENSDARG00000003058ENSDART00000010494ENSDART00000131422ENSDART00000137007ENSDART00000153066ENSDARG00000087474ENSDART00000122256ENSDART00000157305CIL_0002HA_0002ENSG00000213066ENST00000349556ENST00000366847ENST00000476078ENST00000488525ENST00000494781ENST00000496181ENST00000622353ENSG00000272980ENST00000400926ENST00000609590CIL_0002HA_0003ENSMUSG00000040899ENSMUST00000097418ENSMUST00000164411ENSMUST00000166348ENSMUST00000167956ENSMUST00000177568ENSMUST00000180103ENSMUSG00000069135ENSMUST00000024636ENSMUST00000097419ENSMUST00000161898ENSMUST00000162586
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002HA_0001ENSDARG00000003058ENSDART00000010494ENSDART00000131422ENSDART00000153066ENSDARG00000087474ENSDART00000122256ENSDART00000157305CIL_0002HA_0002ENSG00000213066ENST00000349556ENST00000366847ENST00000622353ENSG00000272980ENST00000400926ENST00000609590CIL_0002HA_0003ENSMUSG00000040899ENSMUST00000097418ENSMUST00000164411ENSMUST00000166348ENSMUST00000167956ENSMUST00000177568ENSMUST00000180103ENSMUSG00000069135ENSMUST00000024636ENSMUST00000097419ENSMUST00000161898ENSMUST00000162586
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003058 ENSDART00000010494 N/A N/A N/A 11.857±0.00 N/A N/A 0.129±0.00 2.396±0.00 0.136±0.00 N/A 1.613±0.00 N/A N/A N/A
ENSDART00000131422 N/A N/A N/A 5.589±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000153066 N/A N/A N/A 11.882±0.04 N/A N/A N/A 1.039±0.00 0.337±0.00 N/A 2.101±0.00 N/A N/A N/A
ENSDARG00000087474 ENSDART00000122256 N/A N/A N/A 0.227±0.14 N/A N/A 0.642±0.00 0.920±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000157305 N/A N/A N/A 0.882±0.00 N/A N/A 1.522±0.00 0.167±0.00 0.151±0.00 N/A 0.267±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000213066 ENST00000349556 1.138±0.00 N/A 1.952±0.00 1.940±0.56 2.411±1.33 3.609±1.40 1.225±0.08 5.111±0.12 2.190±0.85 1.839±0.80 0.513±0.04 14.176±11.29 2.311±1.00 30.911±7.83
ENST00000366847 0.078±0.00 0.299±0.00 0.222±0.00 0.150±0.00 0.141±0.04 0.218±0.07 0.115±0.01 0.323±0.01 0.140±0.00 0.153±0.03 0.021±0.00 1.294±0.95 0.096±0.00 0.501±0.00
ENST00000476078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622353 0.496±0.00 1.349±0.00 0.763±0.00 1.083±0.30 1.332±0.09 0.990±0.00 0.793±0.44 1.715±0.00 1.256±0.69 0.731±0.00 0.341±0.06 7.504±6.43 0.781±0.12 6.696±2.99
ENSG00000272980 ENST00000400926 N/A 1.082±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609590 N/A N/A N/A 0.257±0.00 N/A 0.848±0.00 N/A N/A 0.281±0.00 0.535±0.00 N/A 1.493±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040899 ENSMUST00000097418 0.094±0.05 N/A N/A N/A 1.999±0.56 0.418±0.11 0.041±0.00 0.287±0.08 0.092±0.03 0.355±0.07 N/A N/A N/A N/A
ENSMUST00000164411 N/A N/A 0.019±0.00 N/A N/A 0.175±0.00 N/A 0.178±0.02 N/A 0.749±0.00 N/A 0.045±0.00 0.026±0.00 N/A
ENSMUST00000166348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.513±0.00
ENSMUST00000167956 0.077±0.04 0.205±0.09 0.008±0.00 N/A 4.328±0.82 0.245±0.00 0.198±0.06 0.163±0.18 0.172±0.19 1.199±0.46 N/A 0.124±0.10 0.079±0.05 5.473±2.28
ENSMUST00000177568 N/A N/A 0.058±0.00 N/A N/A N/A N/A N/A 0.131±0.04 N/A N/A N/A N/A N/A
ENSMUST00000180103 N/A N/A N/A N/A 1.596±0.00 0.242±0.01 N/A 0.218±0.09 0.060±0.00 0.240±0.00 N/A N/A N/A N/A
ENSMUSG00000069135 ENSMUST00000024636 1.813±0.26 0.605±0.29 5.962±0.13 4.738±1.25 1.584±0.29 1.241±0.26 2.043±0.29 2.124±0.35 2.954±1.71 1.861±0.86 1.705±0.31 2.440±1.18 4.978±1.20 5.869±1.64
ENSMUST00000097419 0.380±0.00 0.275±0.10 N/A N/A N/A 0.173±0.00 N/A 0.513±0.01 0.415±0.04 N/A 2.235±0.42 0.835±0.33 0.658±0.00 7.670±3.51
ENSMUST00000161898 N/A 0.368±0.00 N/A 3.221±0.00 0.478±0.00 N/A N/A N/A N/A N/A N/A 4.432±0.00 N/A 23.659±0.00
ENSMUST00000162586 N/A 0.146±0.00 N/A 1.959±0.00 0.700±0.00 N/A N/A N/A N/A N/A N/A 0.679±0.20 N/A 23.081±0.00

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