C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: QKI, KH domain containing, RNA binding
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112531 QKI 9606 + 6:163414000-163578596 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000275262 QKI-003 163414643-163570145 protein_coding
  ENST00000361195 QKI-006 163415170-163570747 protein_coding
  ENST00000361752 QKI-001 163414643-163578596 protein_coding
  ENST00000361758 QKI-010 163414000-163573800 nonsense_mediated_decay
  ENST00000392127 QKI-004 163414643-163570145 protein_coding
  ENST00000424802 QKI-007 163415194-163564710 protein_coding
  ENST00000453779 QKI-002 163414643-163570145 protein_coding
  ENST00000537041 QKI-016 163423134-163563454 protein_coding
  ENST00000537124 QKI-013 163423208-163478802 protein_coding
  ENST00000537883 QKI-017 163455331-163571101 protein_coding
  ENST00000540719 QKI-018 163534959-163564699 retained_intron
  ENST00000541696 QKI-019 163566458-163571452 retained_intron
  ENST00000544361 QKI-020 163535080-163569541 protein_coding
  ENST00000544436 QKI-012 163416315-163535044 protein_coding
  ENST00000544823 QKI-014 163455216-163563461 protein_coding
  ENST00000545346 QKI-015 163428995-163534984 nonsense_mediated_decay
  ENST00000545607 QKI-011 163415238-163570741 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000275262ENST00000361195ENST00000361752ENST00000361758ENST00000392127ENST00000424802ENST00000453779
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000275262 N/A N/A 1.584±0.00 17.531±4.82 N/A N/A 6.532±0.00 N/A N/A 4.405±0.00 10.590±0.00 3.947±0.00 N/A N/A
ENST00000361195 N/A N/A N/A N/A N/A N/A N/A N/A 12.327±0.00 N/A N/A N/A 10.733±0.00 21.305±0.00
ENST00000361752 4.724±0.00 1.509±0.00 0.749±0.00 16.449±0.00 4.011±1.82 N/A 9.385±4.21 N/A 1.150±0.00 2.438±0.00 10.489±8.63 2.657±0.00 1.300±0.38 N/A
ENST00000361758 13.768±0.00 8.473±0.00 2.644±0.00 N/A 8.393±3.71 7.571±6.05 11.574±6.80 6.692±4.95 4.353±0.03 6.233±1.83 N/A 9.364±1.70 8.522±0.00 14.000±4.05
ENST00000392127 N/A N/A 1.080±0.00 N/A 2.240±0.00 1.213±0.00 4.209±0.00 1.810±0.00 3.542±0.00 3.957±0.00 4.425±0.00 4.558±0.00 N/A N/A
ENST00000424802 N/A N/A N/A 55.339±0.00 9.709±0.00 N/A N/A 6.389±0.00 N/A N/A 12.671±0.00 N/A N/A N/A
ENST00000453779 11.237±0.00 N/A N/A 72.298±0.00 14.603±0.00 7.078±5.27 8.899±2.69 6.999±0.00 1.807±0.00 8.931±0.00 10.093±0.00 4.392±2.14 5.078±1.40 7.388±0.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W0 CIL_0007W0_0001 VISTA 6:162909359-163510893

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001570 IEA vasculogenesis
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0003729 IEA mRNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0006417 IEA regulation of translation
GO:0007286 IEA spermatid development
GO:0008366 IEA axon ensheathment
GO:0008380 IEA RNA splicing
GO:0010628 IEA positive regulation of gene expression
GO:0017124 IEA SH3 domain binding
GO:0042552 IEA myelination
GO:0042692 IEA muscle cell differentiation
GO:0042759 IEA long-chain fatty acid biosynthetic process
GO:0044822 IDA poly(A) RNA binding
GO:0051028 IEA mRNA transport
GO:0061158 IEA 3'-UTR-mediated mRNA destabilization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002026 qkib QKI, KH domain containing, RNA binding b protein_coding Danio_rerio
ENSDARG00000010018 qki2 QKI, KH domain containing, RNA binding 2 protein_coding Danio_rerio
ENSMUSG00000062078 Qk quaking protein_coding Mus_musculus

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