C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: quaking
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062078 Qk 10090 - 17:10206471-10319361 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042296 Qk-202 10210179-10319361 protein_coding
  ENSMUST00000097414 Qk-203 10206471-10319361 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042296ENSMUST00000097414
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042296 5.518±1.75 2.677±1.40 2.380±0.00 9.856±3.30 5.029±1.59 0.636±0.08 7.637±0.96 2.302±0.39 2.230±0.60 14.428±3.77 4.460±0.00 3.174±0.83 3.679±1.60 2.499±1.38
ENSMUST00000097414 17.505±4.58 8.466±2.78 13.318±0.81 29.689±0.08 13.947±4.95 4.149±0.41 21.175±3.71 8.403±1.28 7.672±2.62 18.937±3.08 12.442±1.11 20.481±6.53 14.328±3.70 26.160±7.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T3 CIL_0007T3_0002 VISTA 17:9749210-10354334
CIL_0007W0 CIL_0007W0_0002 VISTA 17:10172540-10773972

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001570 IMP vasculogenesis
GO:0003723 TAS RNA binding
GO:0003729 IDA mRNA binding
GO:0005515 IEA protein binding
GO:0005634 TAS nucleus
GO:0005737 TAS cytoplasm
GO:0006397 IEA mRNA processing
GO:0006417 IEA regulation of translation
GO:0007286 IGI spermatid development
GO:0008366 IMP axon ensheathment
GO:0008380 IEA RNA splicing
GO:0010628 IMP positive regulation of gene expression
GO:0017124 IEA SH3 domain binding
GO:0042552 IMP myelination
GO:0042692 IMP muscle cell differentiation
GO:0042759 IMP long-chain fatty acid biosynthetic process
GO:0044822 IEA poly(A) RNA binding
GO:0051028 IEA mRNA transport
GO:0061158 IDA 3'-UTR-mediated mRNA destabilization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002026 qkib QKI, KH domain containing, RNA binding b protein_coding Danio_rerio
ENSDARG00000010018 qki2 QKI, KH domain containing, RNA binding 2 protein_coding Danio_rerio
ENSG00000112531 QKI QKI, KH domain containing, RNA binding protein_coding Homo_sapiens

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