C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007W0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2377 VISTA 9606 6:162909359-163510893
GeneTranscriptPositionBiotype
ENSG00000112530 (PACRG)
PARK2 co-regulated 		ENST00000337019 (PACRG-003) 162727132-163315491 protein_coding
ENST00000366888 (PACRG-002) 162727961-163315311 protein_coding
ENST00000366889 (PACRG-001) 162727132-163315492 protein_coding
ENST00000534958 (PACRG-005) 162814245-163179401 protein_coding
ENST00000541974 (PACRG-004) 162814152-163315142 nonsense_mediated_decay
ENST00000542669 (PACRG-009) 162727977-162892021 processed_transcript
ENST00000542936 (PACRG-007) 163062286-163245168 protein_coding
ENST00000544266 (PACRG-008) 162728000-162814335 retained_intron
ENST00000545186 (PACRG-006) 163016209-163095429 processed_transcript
ENST00000611387 (PACRG-201) 163312778-163314987 protein_coding
ENST00000621363 (PACRG-202) 163060843-163090305 protein_coding
ENSG00000112531 (QKI)
QKI, KH domain containing, RNA binding 		ENST00000275262 (QKI-003) 163414643-163570145 protein_coding
ENST00000361195 (QKI-006) 163415170-163570747 protein_coding
ENST00000361752 (QKI-001) 163414643-163578596 protein_coding
ENST00000361758 (QKI-010) 163414000-163573800 nonsense_mediated_decay
ENST00000392127 (QKI-004) 163414643-163570145 protein_coding
ENST00000424802 (QKI-007) 163415194-163564710 protein_coding
ENST00000453779 (QKI-002) 163414643-163570145 protein_coding
ENST00000537041 (QKI-016) 163423134-163563454 protein_coding
ENST00000537124 (QKI-013) 163423208-163478802 protein_coding
ENST00000537883 (QKI-017) 163455331-163571101 protein_coding
ENST00000540719 (QKI-018) 163534959-163564699 retained_intron
ENST00000541696 (QKI-019) 163566458-163571452 retained_intron
ENST00000544361 (QKI-020) 163535080-163569541 protein_coding
ENST00000544436 (QKI-012) 163416315-163535044 protein_coding
ENST00000544823 (QKI-014) 163455216-163563461 protein_coding
ENST00000545346 (QKI-015) 163428995-163534984 nonsense_mediated_decay
ENST00000545607 (QKI-011) 163415238-163570741 nonsense_mediated_decay
ENSG00000217557 (RP11-157L10.1)
 ENST00000404178 (RP11-157L10.1-001) 162957258-162957548 processed_pseudogene
ENSG00000225437 (RP1-257A15.1)
 ENST00000418665 (RP1-257A15.1-003) 163042980-163054161 antisense
ENST00000433489 (RP1-257A15.1-002) 163042979-163051414 antisense
ENST00000440924 (RP1-257A15.1-001) 163042557-163046685 antisense
ENSG00000225683 (RP1-301L19.1)
 ENST00000419182 (RP1-301L19.1-001) 163165414-163191808 antisense
ENST00000612841 (RP1-301L19.1-003) 163189418-163191802 antisense
ENST00000614038 (RP1-301L19.1-002) 163182603-163192002 antisense
ENST00000620150 (RP1-301L19.1-004) 163183376-163191991 antisense
ENST00000622071 (RP1-301L19.1-006) 163170441-163184873 antisense
ENST00000622490 (RP1-301L19.1-005) 163166054-163191943 antisense
ENSG00000270419 (CAHM)
colon adenocarcinoma hypermethylated (non-protein coding) 		ENST00000604200 (CAHM-001) 163413065-163413960 lincRNA
CIL_0007W0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2377 VISTA 10090 17:10172540-10773972
GeneTranscriptPositionBiotype
ENSMUSG00000037196 (Pacrg)
PARK2 co-regulated 		ENSMUST00000041463 (Pacrg-001) 10403012-10840311 protein_coding
ENSMUST00000160599 (Pacrg-002) 10576478-10631067 processed_transcript
ENSMUSG00000044407 (Qk)
 ENSMUST00000053066 (Qk-201) 10319945-10320229 protein_coding
ENSMUSG00000062078 (Qk)
quaking 		ENSMUST00000042296 (Qk-202) 10210179-10319361 protein_coding
ENSMUST00000097414 (Qk-203) 10206471-10319361 protein_coding
ENSMUSG00000089633 (A230009B12Rik)
RIKEN cDNA A230009B12 gene 		ENSMUST00000159422 (A230009B12Rik-003) 10456222-10473759 antisense
ENSMUST00000159602 (A230009B12Rik-001) 10456296-10493055 antisense
ENSMUST00000160738 (A230009B12Rik-004) 10464837-10473758 antisense
ENSMUST00000160763 (A230009B12Rik-002) 10456216-10474123 antisense
ENSMUSG00000089941 (Gm16168)
predicted gene 16168 		ENSMUST00000161091 (Gm16168-002) 10496453-10553169 antisense
ENSMUST00000161274 (Gm16168-001) 10496446-10569396 antisense
ENSMUSG00000099384 (RP24-162O23.1)
RIKEN cDNA 1700110C19 gene 		ENSMUST00000187397 (RP24-162O23.1-002) 10324602-10329307 lincRNA
ENSMUST00000188715 (RP24-162O23.1-001) 10324602-10329307 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007W0_0001ENSG00000112530ENST00000337019ENST00000366888ENST00000366889ENST00000534958ENST00000541974ENST00000542669ENST00000544266ENST00000611387ENST00000621363ENSG00000112531ENST00000275262ENST00000361195ENST00000361752ENST00000361758ENST00000392127ENST00000424802ENST00000453779ENSG00000217557ENST00000404178ENSG00000225437ENST00000418665ENST00000440924ENSG00000225683ENST00000419182ENST00000612841ENST00000614038ENST00000620150ENST00000622071ENST00000622490ENSG00000270419ENST00000604200CIL_0007W0_0002ENSMUSG00000037196ENSMUST00000041463ENSMUST00000160599ENSMUSG00000044407ENSMUST00000053066ENSMUSG00000062078ENSMUST00000042296ENSMUST00000097414ENSMUSG00000089633ENSMUST00000159422ENSMUST00000159602ENSMUST00000160738ENSMUST00000160763ENSMUSG00000089941ENSMUST00000161091ENSMUST00000161274ENSMUSG00000099384ENSMUST00000187397ENSMUST00000188715
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112530 ENST00000337019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.877±0.00 N/A N/A
ENST00000366888 N/A 0.155±0.00 N/A 3.366±0.00 0.296±0.00 N/A N/A 0.892±0.00 0.165±0.00 7.394±0.00 N/A 3.618±3.14 N/A 18.338±4.22
ENST00000366889 N/A N/A N/A 1.219±0.00 0.185±0.00 N/A N/A 0.633±0.00 0.089±0.00 0.339±0.00 0.143±0.00 0.217±0.15 N/A N/A
ENST00000534958 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541974 N/A N/A N/A N/A N/A 0.235±0.00 N/A 0.286±0.00 0.134±0.00 N/A N/A N/A N/A N/A
ENST00000542669 0.153±0.00 N/A N/A N/A 0.185±0.00 N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A
ENST00000542936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544266 N/A N/A N/A 2.135±0.00 N/A N/A N/A N/A N/A 2.776±0.00 N/A N/A N/A N/A
ENST00000545186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611387 0.300±0.00 0.649±0.00 N/A N/A N/A N/A N/A 3.067±0.00 N/A N/A N/A N/A 0.476±0.00 N/A
ENST00000621363 N/A N/A N/A N/A N/A N/A N/A 2.761±0.00 0.681±0.00 N/A 2.356±0.00 N/A 0.183±0.02 N/A
ENSG00000112531 ENST00000275262 N/A N/A 1.584±0.00 17.531±4.82 N/A N/A 6.532±0.00 N/A N/A 4.405±0.00 10.590±0.00 3.947±0.00 N/A N/A
ENST00000361195 N/A N/A N/A N/A N/A N/A N/A N/A 12.327±0.00 N/A N/A N/A 10.733±0.00 21.305±0.00
ENST00000361752 4.724±0.00 1.509±0.00 0.749±0.00 16.449±0.00 4.011±1.82 N/A 9.385±4.21 N/A 1.150±0.00 2.438±0.00 10.489±8.63 2.657±0.00 1.300±0.38 N/A
ENST00000361758 13.768±0.00 8.473±0.00 2.644±0.00 N/A 8.393±3.71 7.571±6.05 11.574±6.80 6.692±4.95 4.353±0.03 6.233±1.83 N/A 9.364±1.70 8.522±0.00 14.000±4.05
ENST00000392127 N/A N/A 1.080±0.00 N/A 2.240±0.00 1.213±0.00 4.209±0.00 1.810±0.00 3.542±0.00 3.957±0.00 4.425±0.00 4.558±0.00 N/A N/A
ENST00000424802 N/A N/A N/A 55.339±0.00 9.709±0.00 N/A N/A 6.389±0.00 N/A N/A 12.671±0.00 N/A N/A N/A
ENST00000453779 11.237±0.00 N/A N/A 72.298±0.00 14.603±0.00 7.078±5.27 8.899±2.69 6.999±0.00 1.807±0.00 8.931±0.00 10.093±0.00 4.392±2.14 5.078±1.40 7.388±0.91
ENST00000537041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000217557 ENST00000404178 0.053±0.00 0.054±0.00 N/A 0.057±0.00 N/A N/A N/A N/A N/A 0.099±0.00 0.049±0.00 N/A N/A 0.140±0.00
ENSG00000225437 ENST00000418665 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.127±0.00 N/A N/A N/A 0.392±0.00
ENST00000433489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440924 N/A N/A N/A N/A N/A N/A N/A 0.193±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000225683 ENST00000419182 N/A 0.015±0.00 0.272±0.00 N/A 0.037±0.00 N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A 0.077±0.00
ENST00000612841 N/A N/A N/A 0.191±0.07 N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A 0.138±0.00
ENST00000614038 N/A N/A 2.445±0.00 N/A 0.055±0.00 0.193±0.00 0.063±0.00 N/A N/A N/A N/A 0.062±0.05 N/A N/A
ENST00000620150 N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A 0.193±0.00
ENST00000622071 N/A N/A N/A N/A N/A N/A N/A N/A 0.105±0.00 N/A 0.259±0.00 N/A N/A N/A
ENST00000622490 N/A N/A N/A N/A N/A N/A 0.441±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000270419 ENST00000604200 0.714±0.00 1.005±0.00 0.076±0.00 5.593±3.37 0.810±0.00 0.588±0.00 0.498±0.23 1.304±0.22 0.327±0.14 1.769±0.00 0.980±0.13 6.654±7.16 0.840±0.52 12.105±9.43
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037196 ENSMUST00000041463 0.206±0.07 0.594±0.17 0.859±0.20 3.192±0.68 0.289±0.17 0.187±0.10 0.379±0.11 0.670±0.22 0.056±0.03 1.123±0.17 1.190±0.22 1.663±0.72 0.204±0.10 116.808±46.03
ENSMUST00000160599 N/A 0.856±0.00 N/A N/A 0.786±0.00 N/A N/A N/A 0.138±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000044407 ENSMUST00000053066 3.108±0.45 7.956±1.87 3.787±1.37 2.806±1.98 5.334±2.80 1.035±0.26 1.559±0.98 2.103±1.13 1.810±0.90 9.923±2.39 0.490±0.13 5.771±2.84 0.914±0.37 3.318±1.80
ENSMUSG00000062078 ENSMUST00000042296 5.518±1.75 2.677±1.40 2.380±0.00 9.856±3.30 5.029±1.59 0.636±0.08 7.637±0.96 2.302±0.39 2.230±0.60 14.428±3.77 4.460±0.00 3.174±0.83 3.679±1.60 2.499±1.38
ENSMUST00000097414 17.505±4.58 8.466±2.78 13.318±0.81 29.689±0.08 13.947±4.95 4.149±0.41 21.175±3.71 8.403±1.28 7.672±2.62 18.937±3.08 12.442±1.11 20.481±6.53 14.328±3.70 26.160±7.58
ENSMUSG00000089633 ENSMUST00000159422 N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A 0.138±0.05 N/A N/A 0.056±0.00
ENSMUST00000159602 0.034±0.02 N/A 0.030±0.00 0.074±0.06 0.044±0.02 N/A 0.016±0.00 0.019±0.00 N/A N/A 0.103±0.05 0.027±0.00 0.016±0.01 0.095±0.07
ENSMUST00000160738 0.092±0.02 N/A 0.025±0.00 0.137±0.11 0.130±0.07 0.119±0.00 0.298±0.06 N/A 0.011±0.00 0.065±0.00 0.163±0.03 0.276±0.00 0.008±0.00 0.127±0.03
ENSMUST00000160763 N/A N/A N/A 0.030±0.00 0.079±0.00 N/A 0.060±0.00 0.052±0.02 N/A N/A 0.099±0.04 N/A N/A N/A
ENSMUSG00000089941 ENSMUST00000161091 1.037±0.46 0.394±0.25 0.019±0.00 0.045±0.00 0.446±0.25 N/A 0.096±0.05 0.024±0.00 0.022±0.00 0.096±0.05 0.101±0.05 0.134±0.07 0.021±0.01 0.346±0.14
ENSMUST00000161274 3.043±1.30 0.681±0.35 0.198±0.14 0.147±0.08 2.023±0.99 N/A 0.215±0.01 0.379±0.13 N/A 0.406±0.09 0.144±0.02 0.521±0.21 N/A 0.457±0.19
ENSMUSG00000099384 ENSMUST00000187397 0.153±0.00 N/A N/A 0.553±0.00 0.219±0.08 N/A 0.186±0.08 0.071±0.02 0.149±0.01 N/A 0.044±0.00 0.403±0.12 0.170±0.10 6.453±2.83
ENSMUST00000188715 N/A 0.221±0.07 N/A 0.547±0.00 0.226±0.16 0.154±0.04 N/A 0.108±0.00 N/A 0.070±0.00 0.128±0.00 0.394±0.21 N/A 4.775±0.90

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