C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: QKI, KH domain containing, RNA binding
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392127 QKI-004 ENSG00000112531 9606 + 6:163414643-163570145 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungMuscleOvaryENST00000392127
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000392127 1.080±0.00 2.240±0.00 1.213±0.00 4.209±0.00 1.810±0.00 3.542±0.00 3.957±0.00 4.425±0.00 4.558±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W0 CIL_0007W0_0001 VISTA 6:162909359-163510893

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0006417 IEA regulation of translation
GO:0008380 IEA RNA splicing
GO:0017124 IEA SH3 domain binding
GO:0044822 IDA poly(A) RNA binding
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042296 Qk-202 protein_coding Mus_musculus 0 1978
ENSMUST00000097414 Qk-203 protein_coding Mus_musculus 0 1947
ENSDART00000018737 qkib-201 protein_coding Danio_rerio 0 630
ENSDART00000131553 qkib-002 protein_coding Danio_rerio 0 278

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