C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MyoD family inhibitor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112559 MDFI 9606 + 6:41636882-41654246 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000230321 MDFI-001 41638447-41654246 protein_coding
  ENST00000373050 MDFI-002 41638477-41653639 protein_coding
  ENST00000373051 MDFI-008 41637068-41654239 protein_coding
  ENST00000419164 MDFI-003 41637032-41653528 protein_coding
  ENST00000432027 MDFI-005 41636882-41653474 protein_coding
  ENST00000435476 MDFI-007 41638527-41653444 protein_coding
  ENST00000441667 MDFI-009 41638438-41649653 protein_coding
  ENST00000446650 MDFI-006 41638499-41649743 protein_coding
  ENST00000471092 MDFI-004 41646254-41650112 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000230321ENST00000373050ENST00000373051ENST00000419164ENST00000432027ENST00000435476ENST00000441667ENST00000446650ENST00000471092
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000230321 0.341±0.00 N/A N/A N/A N/A N/A 0.169±0.00 0.455±0.00 N/A 1.941±1.23 N/A 15.916±7.90 3.923±0.15 2.376±0.00
ENST00000373050 3.058±0.00 4.215±0.00 0.573±0.00 0.565±0.00 12.782±0.00 N/A N/A 0.427±0.00 N/A 10.829±0.00 N/A N/A 4.698±0.00 2.193±0.24
ENST00000373051 N/A N/A 0.057±0.00 0.032±0.00 0.241±0.00 0.287±0.16 0.083±0.00 N/A 0.077±0.00 N/A 0.087±0.00 2.724±0.15 4.922±0.00 0.781±0.00
ENST00000419164 0.566±0.00 3.997±0.00 N/A N/A 4.135±3.70 0.391±0.00 N/A 0.196±0.00 N/A N/A N/A 5.826±5.04 7.707±2.40 1.885±0.06
ENST00000432027 N/A N/A N/A 0.586±0.00 N/A 0.131±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435476 N/A N/A N/A N/A N/A N/A 0.143±0.00 N/A 0.298±0.00 N/A N/A N/A N/A N/A
ENST00000441667 2.301±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446650 N/A N/A N/A 0.436±0.00 N/A N/A 0.151±0.00 1.144±0.00 0.401±0.00 N/A 2.103±0.00 N/A N/A N/A
ENST00000471092 N/A N/A N/A N/A N/A 0.445±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008F3 CIL_0008F3_0001 VISTA 6:41112821-41713777
CIL_0007QG CIL_0007QG_0001 VISTA 6:41166717-41767957
CIL_0008IB CIL_0008IB_0001 VISTA 6:41169077-41770286
CIL_0008XI CIL_0008XI_0001 VISTA 6:41187113-41790491
CIL_00093V CIL_00093V_0001 VISTA 6:41255486-41855939
CIL_000963 CIL_000963_0001 VISTA 6:41292979-41894337
CIL_00028Z CIL_00028Z_0002 CGP 6:41546426-41654246
CIL_00028Y CIL_00028Y_0002 CGP 6:41636882-41736259

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0007257 IEA activation of JUN kinase activity
GO:0008134 IEA transcription factor binding
GO:0009790 TAS embryo development
GO:0009950 ISS dorsal/ventral axis specification
GO:0030111 IEA regulation of Wnt signaling pathway
GO:0030178 ISS negative regulation of Wnt signaling pathway
GO:0042994 TAS cytoplasmic sequestering of transcription factor
GO:0043392 ISS negative regulation of DNA binding
GO:0048704 IEA embryonic skeletal system morphogenesis
GO:0060707 IEA trophoblast giant cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089564 MDFI MyoD family inhibitor protein_coding Danio_rerio
ENSMUSG00000032717 Mdfi MyoD family inhibitor protein_coding Mus_musculus

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