C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MyoD family inhibitor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373050 MDFI-002 ENSG00000112559 9606 + 6:41638477-41653639 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLungPlacentaTestisENST00000373050
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Lung Placenta Testis
ENST00000373050 3.058±0.00 4.215±0.00 0.573±0.00 0.565±0.00 12.782±0.00 0.427±0.00 10.829±0.00 4.698±0.00 2.193±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008F3 CIL_0008F3_0001 VISTA 6:41112821-41713777
CIL_0007QG CIL_0007QG_0001 VISTA 6:41166717-41767957
CIL_0008IB CIL_0008IB_0001 VISTA 6:41169077-41770286
CIL_0008XI CIL_0008XI_0001 VISTA 6:41187113-41790491
CIL_00093V CIL_00093V_0001 VISTA 6:41255486-41855939
CIL_000963 CIL_000963_0001 VISTA 6:41292979-41894337
CIL_00028Z CIL_00028Z_0002 CGP 6:41546426-41654246
CIL_00028Y CIL_00028Y_0002 CGP 6:41636882-41736259

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113280 Mdfi-008 protein_coding Mus_musculus 0 575
ENSMUST00000035375 Mdfi-003 protein_coding Mus_musculus 0 473
ENSMUST00000066368 Mdfi-001 protein_coding Mus_musculus 0 473
ENSMUST00000125745 Mdfi-007 processed_transcript Mus_musculus 0 453
ENSMUST00000131971 Mdfi-009 protein_coding Mus_musculus 0 379
ENSDART00000136166 MDFIC (2 of 2)-001 protein_coding Danio_rerio 4e-36 156
ENSDART00000110535 MDFIC (1 of 2)-201 protein_coding Danio_rerio 4e-36 156

Loading