C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Fas associated factor family member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113194 FAF2 9606 + 5:176447628-176510074 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261942 FAF2-001 176448355-176510074 protein_coding
  ENST00000504983 FAF2-006 176492239-176498977 retained_intron
  ENST00000506061 FAF2-004 176448429-176453559 processed_transcript
  ENST00000510446 FAF2-005 176453139-176489027 processed_transcript
  ENST00000510730 FAF2-003 176447628-176486427 protein_coding
  ENST00000513627 FAF2-007 176494022-176496986 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261942
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261942 8.105±0.00 7.613±0.00 2.220±0.00 7.558±1.46 6.071±1.79 4.063±1.67 3.034±1.42 7.240±1.73 5.743±1.16 4.908±0.44 2.643±1.41 8.129±5.24 8.678±0.59 10.285±2.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098R CIL_00098R_0001 VISTA 5:176349731-176951529
CIL_0002N7 CIL_0002N7_0001 CGP 5:176392455-176510074
CIL_0000OZ CIL_0000OZ_0002 CGP 5:176447628-176538025

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005811 IDA lipid particle
GO:0006986 IEA response to unfolded protein
GO:0031625 IDA ubiquitin protein ligase binding
GO:0034098 IDA Cdc48p-Npl4p-Ufd1p AAA ATPase complex
GO:0034389 IMP lipid particle organization
GO:0035473 IDA lipase binding
GO:0043086 IDA negative regulation of catalytic activity
GO:0043130 IDA ubiquitin binding
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0055102 IDA lipase inhibitor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052374 faf2 Fas associated factor family member 2 protein_coding Danio_rerio
ENSMUSG00000025873 Faf2 Fas associated factor family member 2 protein_coding Mus_musculus

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