C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002N7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175416-ENSG00000113194 CGP 9606 5:176392455-176510074
GeneTranscriptPositionBiotype
ENSG00000113194 (FAF2)
Fas associated factor family member 2 		ENST00000261942 (FAF2-001) 176448355-176510074 protein_coding
ENST00000504983 (FAF2-006) 176492239-176498977 retained_intron
ENST00000506061 (FAF2-004) 176448429-176453559 processed_transcript
ENST00000510446 (FAF2-005) 176453139-176489027 processed_transcript
ENST00000510730 (FAF2-003) 176447628-176486427 protein_coding
ENST00000513627 (FAF2-007) 176494022-176496986 retained_intron
ENSG00000175414 (ARL10)
ADP-ribosylation factor-like 10 		ENST00000310389 (ARL10-001) 176365468-176381909 protein_coding
ENST00000503175 (ARL10-003) 176368947-176388638 protein_coding
ENST00000507151 (ARL10-004) 176366538-176369127 retained_intron
ENST00000514533 (ARL10-002) 176368850-176401865 protein_coding
ENSG00000175416 (CLTB)
clathrin, light chain B 		ENST00000310418 (CLTB-001) 176392455-176416569 protein_coding
ENST00000345807 (CLTB-002) 176392455-176416569 protein_coding
ENST00000502877 (CLTB-005) 176392793-176416538 protein_coding
ENST00000507821 (CLTB-007) 176405590-176406340 processed_transcript
ENST00000508425 (CLTB-006) 176392642-176416261 protein_coding
ENST00000509319 (CLTB-004) 176406167-176407591 processed_transcript
ENST00000510734 (CLTB-003) 176392649-176416539 nonsense_mediated_decay
ENSG00000221373 (AC010297.1)
 ENST00000408446 (AC010297.1-201) 176451762-176451872 miRNA
CIL_0002N7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047547-ENSMUSG00000025873 CGP 10090 13:54592401-54664068
GeneTranscriptPositionBiotype
ENSMUSG00000025873 (Faf2)
Fas associated factor family member 2 		ENSMUST00000026991 (Faf2-006) 54621824-54661586 protein_coding
ENSMUST00000124752 (Faf2-003) 54621838-54656359 protein_coding
ENSMUST00000126071 (Faf2-001) 54621784-54664068 protein_coding
ENSMUST00000135015 (Faf2-002) 54621804-54641540 nonsense_mediated_decay
ENSMUST00000135232 (Faf2-004) 54621835-54648428 protein_coding
ENSMUST00000137413 (Faf2-005) 54621835-54648317 protein_coding
ENSMUST00000141915 (Faf2-007) 54651441-54655546 retained_intron
ENSMUST00000153894 (Faf2-008) 54641543-54655521 nonsense_mediated_decay
ENSMUSG00000047547 (Cltb)
clathrin, light polypeptide (Lcb) 		ENSMUST00000049575 (Cltb-003) 54593585-54611292 protein_coding
ENSMUST00000091609 (Cltb-001) 54592401-54611344 protein_coding
ENSMUST00000140142 (Cltb-004) 54593538-54599161 protein_coding
ENSMUST00000146301 (Cltb-002) 54596040-54611292 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002N7_0001ENSG00000113194ENST00000261942ENST00000504983ENST00000506061ENST00000510446ENST00000510730ENST00000513627ENSG00000175414ENST00000310389ENST00000503175ENST00000507151ENST00000514533ENSG00000175416ENST00000310418ENST00000345807ENST00000502877ENST00000507821ENST00000508425ENST00000509319ENST00000510734ENSG00000221373ENST00000408446CIL_0002N7_0002ENSMUSG00000025873ENSMUST00000026991ENSMUST00000124752ENSMUST00000126071ENSMUST00000135015ENSMUST00000135232ENSMUST00000137413ENSMUST00000141915ENSMUST00000153894ENSMUSG00000047547ENSMUST00000049575ENSMUST00000091609ENSMUST00000140142ENSMUST00000146301
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002N7_0001ENSG00000113194ENST00000261942ENSG00000175414ENST00000310389ENSG00000175416ENST00000310418ENST00000345807ENST00000502877ENST00000508425ENST00000510734ENSG00000221373ENST00000408446CIL_0002N7_0002ENSMUSG00000025873ENSMUST00000026991ENSMUST00000124752ENSMUST00000126071ENSMUST00000153894ENSMUSG00000047547ENSMUST00000049575ENSMUST00000091609ENSMUST00000140142ENSMUST00000146301
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113194 ENST00000261942 8.105±0.00 7.613±0.00 2.220±0.00 7.558±1.46 6.071±1.79 4.063±1.67 3.034±1.42 7.240±1.73 5.743±1.16 4.908±0.44 2.643±1.41 8.129±5.24 8.678±0.59 10.285±2.30
ENST00000504983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175414 ENST00000310389 0.849±0.00 1.653±0.00 0.095±0.00 1.504±0.28 0.803±0.11 0.661±0.34 0.519±0.42 0.619±0.29 0.347±0.00 0.693±0.08 0.626±0.36 1.606±0.43 0.613±0.00 0.995±0.44
ENST00000503175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175416 ENST00000310418 N/A N/A N/A 49.450±25.66 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000345807 52.639±0.00 72.603±0.00 2.663±0.00 14.865±11.67 36.188±30.62 44.718±31.94 56.665±46.61 33.896±29.10 21.566±12.88 38.609±33.09 52.941±30.01 89.588±56.34 228.848±48.60 60.249±1.88
ENST00000502877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.114±0.00 1.795±0.00 N/A N/A
ENST00000507821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508425 31.218±0.00 37.379±0.00 N/A 43.255±0.00 39.034±0.00 47.879±0.00 N/A 26.690±0.00 12.362±0.00 34.338±0.00 47.792±0.00 N/A N/A 29.412±0.00
ENST00000509319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510734 N/A N/A 0.642±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221373 ENST00000408446 N/A N/A N/A 0.185±0.00 0.166±0.00 N/A 0.224±0.00 0.092±0.00 N/A 0.074±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025873 ENSMUST00000026991 N/A N/A N/A N/A N/A N/A N/A N/A 5.360±0.00 N/A N/A 5.410±0.00 14.874±11.20 3.858±0.00
ENSMUST00000124752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.142±0.00 8.566±0.00 23.572±0.00
ENSMUST00000126071 12.212±3.78 13.810±1.06 14.381±0.10 8.626±5.09 10.395±0.95 13.211±0.31 3.883±0.32 11.194±0.56 10.290±1.62 11.919±0.82 2.492±0.42 14.104±2.64 12.925±9.09 9.001±3.69
ENSMUST00000135015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153894 N/A N/A N/A 17.987±0.00 N/A N/A N/A N/A N/A N/A N/A 29.135±0.00 55.662±17.53 N/A
ENSMUSG00000047547 ENSMUST00000049575 15.412±5.55 23.626±3.57 20.458±3.31 60.135±51.70 22.283±3.32 52.709±6.83 16.566±6.11 32.239±5.41 11.566±5.70 34.478±2.31 27.668±4.58 11.349±2.85 37.637±21.18 4.363±2.26
ENSMUST00000091609 12.351±3.27 10.247±1.49 23.581±1.24 10.499±1.09 9.915±2.54 27.632±4.07 10.033±1.94 17.561±1.05 8.418±2.92 21.449±1.22 20.669±1.01 6.384±2.12 18.279±8.75 2.990±0.50
ENSMUST00000140142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.377±4.64 N/A 9.185±0.00
ENSMUST00000146301 N/A N/A N/A 3.708±0.72 0.921±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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