C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Fas associated factor family member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025873 Faf2 10090 + 13:54621784-54664068 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026991 Faf2-006 54621824-54661586 protein_coding
  ENSMUST00000124752 Faf2-003 54621838-54656359 protein_coding
  ENSMUST00000126071 Faf2-001 54621784-54664068 protein_coding
  ENSMUST00000135015 Faf2-002 54621804-54641540 nonsense_mediated_decay
  ENSMUST00000135232 Faf2-004 54621835-54648428 protein_coding
  ENSMUST00000137413 Faf2-005 54621835-54648317 protein_coding
  ENSMUST00000141915 Faf2-007 54651441-54655546 retained_intron
  ENSMUST00000153894 Faf2-008 54641543-54655521 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026991ENSMUST00000124752ENSMUST00000126071ENSMUST00000153894
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026991 N/A N/A N/A N/A N/A N/A N/A N/A 5.360±0.00 N/A N/A 5.410±0.00 14.874±11.20 3.858±0.00
ENSMUST00000124752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.142±0.00 8.566±0.00 23.572±0.00
ENSMUST00000126071 12.212±3.78 13.810±1.06 14.381±0.10 8.626±5.09 10.395±0.95 13.211±0.31 3.883±0.32 11.194±0.56 10.290±1.62 11.919±0.82 2.492±0.42 14.104±2.64 12.925±9.09 9.001±3.69
ENSMUST00000153894 N/A N/A N/A 17.987±0.00 N/A N/A N/A N/A N/A N/A N/A 29.135±0.00 55.662±17.53 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098R CIL_00098R_0002 VISTA 13:54491283-55092527
CIL_0002N7 CIL_0002N7_0002 CGP 13:54592401-54664068
CIL_0000OZ CIL_0000OZ_0003 CGP 13:54621784-54693907

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005811 IEA lipid particle
GO:0006986 IEA response to unfolded protein
GO:0031625 IEA ubiquitin protein ligase binding
GO:0034098 IEA Cdc48p-Npl4p-Ufd1p AAA ATPase complex
GO:0034389 IEA lipid particle organization
GO:0035473 IEA lipase binding
GO:0043086 IEA negative regulation of catalytic activity
GO:0043130 IEA ubiquitin binding
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0055102 IEA lipase inhibitor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052374 faf2 Fas associated factor family member 2 protein_coding Danio_rerio
ENSG00000113194 FAF2 Fas associated factor family member 2 protein_coding Homo_sapiens

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