C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gamma-aminobutyric acid (GABA) A receptor, gamma 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113327 GABRG2 9606 + 5:162067540-162155536 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356592 GABRG2-001 162067540-162155536 protein_coding
  ENST00000361925 GABRG2-002 162067780-162153483 protein_coding
  ENST00000414552 GABRG2-003 162067775-162155522 protein_coding
  ENST00000522053 GABRG2-005 162094534-162149137 protein_coding
  ENST00000522990 GABRG2-006 162067874-162154045 nonsense_mediated_decay
  ENST00000523372 GABRG2-004 162068000-162153804 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMusclePlacentaTestisENST00000356592ENST00000361925ENST00000414552ENST00000522053ENST00000522990ENST00000523372
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENST00000356592 N/A 10.558±7.27 N/A 0.025±0.00 N/A N/A 0.023±0.00 N/A N/A N/A N/A
ENST00000361925 N/A N/A N/A 0.213±0.00 N/A 0.010±0.00 0.110±0.00 N/A N/A N/A 0.198±0.08
ENST00000414552 0.005±0.00 9.467±0.00 0.058±0.05 N/A 0.032±0.00 N/A N/A 0.014±0.00 0.010±0.00 0.061±0.05 N/A
ENST00000522053 N/A N/A N/A 0.136±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000522990 N/A 14.377±0.00 0.089±0.00 N/A N/A N/A N/A N/A N/A 0.036±0.00 0.059±0.00
ENST00000523372 N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A 0.104±0.00 0.135±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016P CIL_00016P_0002 CGP 5:161847191-162155536

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004890 ISS GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 ISS chloride channel activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005886 IEA:TAS plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0006810 TAS:IEA transport
GO:0006811 IEA ion transport
GO:0006821 IEA chloride transport
GO:0007214 IEA gamma-aminobutyric acid signaling pathway
GO:0007268 TAS synaptic transmission
GO:0008503 TAS benzodiazepine receptor activity
GO:0009791 IEA post-embryonic development
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0030424 IEA axon
GO:0030534 IEA adult behavior
GO:0032590 ISS dendrite membrane
GO:0034220 IEA:TAS ion transmembrane transport
GO:0034707 IEA chloride channel complex
GO:0045211 IEA postsynaptic membrane
GO:0051932 ISS synaptic transmission, GABAergic
GO:0055085 TAS transmembrane transport
GO:0060077 IEA inhibitory synapse
GO:0071420 ISS cellular response to histamine
GO:1902476 ISS chloride transmembrane transport
GO:1902711 ISS GABA-A receptor complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053665 gabrg2 gamma-aminobutyric acid (GABA) A receptor, gamma 2 protein_coding Danio_rerio
ENSMUSG00000020436 Gabrg2 gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 protein_coding Mus_musculus

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