C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: gamma-aminobutyric acid (GABA) A receptor, gamma 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000523372 GABRG2-004 ENSG00000113327 9606 + 5:162068000-162153804 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyPlacentaTestisENST00000523372
Transcript ID Kidney Placenta Testis
ENST00000523372 0.016±0.00 0.104±0.00 0.135±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016P CIL_00016P_0002 CGP 5:161847191-162155536

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0006821 IEA chloride transport
GO:0007214 IEA gamma-aminobutyric acid signaling pathway
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070725 Gabrg2-001 protein_coding Mus_musculus 0 1838
ENSMUST00000070735 Gabrg2-003 protein_coding Mus_musculus 0 1722
ENSMUST00000109290 Gabrg2-002 protein_coding Mus_musculus 0 1367
ENSMUST00000146198 Gabrg2-004 retained_intron Mus_musculus 0 743

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