| Transcript ID | Colon | Ovary |
|---|---|---|
| ENST00000231484 | 1.055±0.00 | 1.427±0.58 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | protocadherin 12 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000113555  |
PCDH12 | 9606 | - |
5:141943585-141969741  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000231484 |
PCDH12-001 | 141943585-141959062 | protein_coding | ||
| ENST00000510041 |
PCDH12-003 | 141957781-141958812 | protein_coding | ||
| ENST00000512221 |
PCDH12-004 | 141958037-141969741 | processed_transcript | ||
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006QF | CIL_0006QF_0001 | CGP | 5:141923808-141969741 |
| CIL_0006QG | CIL_0006QG_0001 | CGP | 5:141943585-141990291 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005509 | IEA | calcium ion binding |
| GO:0005886 | TAS | plasma membrane |
| GO:0005887 | TAS | integral component of plasma membrane |
| GO:0005911 | IEA | cell-cell junction |
| GO:0005977 | IEA | glycogen metabolic process |
| GO:0007156 | IEA | homophilic cell adhesion via plasma membrane adhesion molecules |
| GO:0008038 | TAS | neuron recognition |
| GO:0016020 | IEA | membrane |
| GO:0016339 | IEA | calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules |
| GO:0060711 | IEA | labyrinthine layer development |
| GO:0070062 | IDA | extracellular vesicular exosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000076594
|
PCDH12 | protocadherin 12 | protein_coding | Danio_rerio | |
|
ENSMUSG00000024440
|
Pcdh12 | protocadherin 12 | protein_coding | Mus_musculus | |
