C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006QF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000081791-ENSG00000113555 CGP 9606 5:141923808-141969741
GeneTranscriptPositionBiotype
ENSG00000013561 (RNF14)
ring finger protein 14 		ENST00000347642 (RNF14-201) 141968886-141990290 protein_coding
ENST00000356143 (RNF14-202) 141966837-141990290 protein_coding
ENST00000394514 (RNF14-002) 141969111-141989185 protein_coding
ENST00000394519 (RNF14-203) 141966837-141990290 protein_coding
ENST00000394520 (RNF14-001) 141969039-141990291 protein_coding
ENST00000502341 (RNF14-009) 141969104-141978762 processed_transcript
ENST00000506004 (RNF14-008) 141969269-141973634 protein_coding
ENST00000506822 (RNF14-004) 141958337-141978394 protein_coding
ENST00000506938 (RNF14-010) 141969105-141978509 protein_coding
ENST00000507163 (RNF14-006) 141969157-141978553 protein_coding
ENST00000507291 (RNF14-007) 141969277-141974833 protein_coding
ENST00000511961 (RNF14-003) 141958328-141978830 protein_coding
ENST00000512565 (RNF14-013) 141969136-141984933 protein_coding
ENST00000513019 (RNF14-005) 141966820-141974947 protein_coding
ENST00000514620 (RNF14-011) 141969095-141980277 processed_transcript
ENST00000515613 (RNF14-012) 141969151-141983552 nonsense_mediated_decay
ENSG00000081791 (KIAA0141)
KIAA0141 		ENST00000194118 (KIAA0141-003) 141923855-141940120 protein_coding
ENST00000432126 (KIAA0141-001) 141923808-141942047 protein_coding
ENST00000502729 (KIAA0141-006) 141930247-141934996 retained_intron
ENST00000506775 (KIAA0141-004) 141931219-141933882 processed_transcript
ENST00000507481 (KIAA0141-002) 141934240-141940146 protein_coding
ENST00000508751 (KIAA0141-005) 141923910-141934326 protein_coding
ENST00000509110 (KIAA0141-007) 141937074-141938948 retained_intron
ENSG00000113555 (PCDH12)
protocadherin 12 		ENST00000231484 (PCDH12-001) 141943585-141959062 protein_coding
ENST00000510041 (PCDH12-003) 141957781-141958812 protein_coding
ENST00000512221 (PCDH12-004) 141958037-141969741 processed_transcript
ENSG00000271871 (AC005740.6)
 ENST00000607378 (AC005740.6-001) 141952419-141953375 antisense

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Structures from Ensembl
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CIL_0006QF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024442-ENSMUSG00000024440 CGP 10090 18:38250249-38284401
GeneTranscriptPositionBiotype
ENSMUSG00000024440 (Pcdh12)
protocadherin 12 		ENSMUST00000025311 (Pcdh12-201) 38267092-38284401 protein_coding
ENSMUSG00000024442 (0610009O20Rik)
RIKEN cDNA 0610009O20 gene 		ENSMUST00000025314 (0610009O20Rik-201) 38250249-38262629 protein_coding

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QF_0001ENSG00000013561ENST00000347642ENST00000356143ENST00000394514ENST00000394519ENST00000394520ENST00000502341ENST00000506004ENST00000506822ENST00000506938ENST00000507163ENST00000507291ENST00000511961ENST00000512565ENST00000513019ENST00000514620ENST00000515613ENSG00000081791ENST00000194118ENST00000432126ENST00000502729ENST00000506775ENST00000507481ENST00000508751ENST00000509110ENSG00000113555ENST00000231484ENST00000510041ENST00000512221ENSG00000271871ENST00000607378CIL_0006QF_0002ENSMUSG00000024440ENSMUST00000025311ENSMUSG00000024442ENSMUST00000025314
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QF_0001ENSG00000013561ENST00000347642ENST00000356143ENST00000394514ENST00000394520ENST00000506938ENST00000507163ENST00000515613ENSG00000081791ENST00000194118ENST00000432126ENST00000502729ENST00000507481ENST00000508751ENSG00000113555ENST00000231484ENSG00000271871ENST00000607378CIL_0006QF_0002ENSMUSG00000024440ENSMUST00000025311ENSMUSG00000024442ENSMUST00000025314
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000013561 ENST00000347642 N/A 1.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000356143 N/A N/A N/A N/A N/A N/A N/A 0.802±0.00 N/A N/A N/A N/A N/A N/A
ENST00000394514 6.460±0.00 5.091±0.00 5.307±0.00 6.686±4.09 5.390±1.31 4.033±1.54 8.120±1.15 5.603±0.16 4.374±2.44 4.189±0.00 3.707±0.43 4.837±2.31 13.478±4.48 22.571±17.14
ENST00000394519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.124±0.00 N/A N/A
ENST00000502341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.343±1.30 N/A N/A N/A
ENST00000507163 N/A N/A N/A N/A N/A N/A N/A 6.124±0.00 N/A N/A N/A N/A N/A N/A
ENST00000507291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.037±0.00 41.929±0.00 108.131±0.00
ENSG00000081791 ENST00000194118 7.948±0.00 10.794±0.00 N/A 2.725±0.00 6.143±0.00 5.058±0.00 9.695±0.00 4.870±3.36 N/A 7.084±0.00 6.606±0.00 7.089±3.32 13.126±4.05 5.114±0.39
ENST00000432126 1.562±0.00 N/A 0.707±0.00 1.302±0.14 2.026±0.00 2.029±0.00 0.930±0.00 3.489±1.14 1.691±0.46 1.331±0.00 0.535±0.37 4.312±0.36 2.667±1.39 2.439±0.00
ENST00000502729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.544±0.00 16.330±0.00 7.877±0.00
ENST00000506775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507481 4.401±0.00 N/A 1.248±0.00 2.815±0.00 3.408±0.00 3.140±0.00 N/A 6.810±0.00 8.050±0.00 8.894±0.00 3.580±0.06 6.305±0.81 6.879±0.00 6.249±2.23
ENST00000508751 N/A N/A N/A 3.245±0.00 2.536±0.00 3.958±0.00 2.573±0.00 3.697±0.00 N/A N/A 3.525±2.39 N/A N/A N/A
ENST00000509110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000113555 ENST00000231484 N/A N/A N/A N/A N/A 1.055±0.00 N/A N/A N/A N/A N/A 1.427±0.58 N/A N/A
ENST00000510041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000271871 ENST00000607378 0.166±0.00 0.389±0.00 0.576±0.00 0.170±0.00 0.094±0.02 0.148±0.00 0.200±0.02 0.140±0.00 0.332±0.00 1.008±0.08 N/A 0.241±0.10 0.170±0.03 0.138±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024440 ENSMUST00000025311 3.666±0.40 3.444±0.36 0.158±0.04 0.871±0.74 2.595±0.56 1.016±0.15 2.978±0.29 3.713±0.27 0.744±0.27 8.407±0.44 0.952±0.28 1.623±0.30 11.464±5.74 0.064±0.03
ENSMUSG00000024442 ENSMUST00000025314 23.379±2.77 44.557±19.95 16.853±2.00 12.447±5.79 17.939±8.53 24.579±10.07 53.695±22.76 33.480±7.96 22.644±6.38 19.474±4.43 41.828±1.96 28.269±9.31 22.889±9.49 18.512±7.79

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