C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FERM domain containing 4B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000114541 FRMD4B 9606 - 3:69169990-69542583 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000398540 FRMD4B-001 69169990-69386073 protein_coding
  ENST00000459638 FRMD4B-007 69287751-69542583 protein_coding
  ENST00000460709 FRMD4B-011 69224683-69353697 protein_coding
  ENST00000462308 FRMD4B-012 69306407-69320982 processed_transcript
  ENST00000462512 FRMD4B-017 69195249-69200898 protein_coding
  ENST00000462888 FRMD4B-009 69376807-69386088 processed_transcript
  ENST00000470070 FRMD4B-003 69197715-69320944 retained_intron
  ENST00000473029 FRMD4B-013 69224607-69320954 protein_coding
  ENST00000473188 FRMD4B-002 69287645-69386304 retained_intron
  ENST00000478263 FRMD4B-005 69170807-69200848 protein_coding
  ENST00000483668 FRMD4B-016 69198697-69250212 retained_intron
  ENST00000487751 FRMD4B-015 69198726-69250248 retained_intron
  ENST00000489817 FRMD4B-019 69196896-69199270 protein_coding
  ENST00000493127 FRMD4B-010 69334172-69385927 processed_transcript
  ENST00000493880 FRMD4B-014 69216263-69293061 protein_coding
  ENST00000497475 FRMD4B-018 69196719-69200521 retained_intron
  ENST00000497757 FRMD4B-008 69333961-69433129 processed_transcript
  ENST00000497880 FRMD4B-006 69310438-69541340 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLungMuscleOvaryPlacentaTestisENST00000398540ENST00000462512ENST00000478263
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000398540 N/A 2.514±0.00 2.100±1.69 0.675±0.06 0.756±0.40 2.476±0.00 1.478±0.29 0.302±0.00 1.097±0.57 2.044±0.71 0.830±0.00
ENST00000462512 N/A N/A N/A N/A N/A 6.460±0.00 N/A N/A N/A N/A N/A
ENST00000478263 0.725±0.00 1.404±0.00 2.986±0.00 0.911±0.12 0.343±0.00 0.774±0.00 N/A 0.163±0.00 1.330±0.45 2.128±1.13 0.274±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003AY CIL_0003AY_0001 CGP 3:69106872-69542583
CIL_0001TC CIL_0001TC_0002 CGP 3:69169990-69968337

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001726 IEA ruffle
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0090162 IEA establishment of epithelial cell polarity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074599 frmd4ba FERM domain containing 4Ba protein_coding Danio_rerio
ENSDARG00000076496 frmd4bb FERM domain containing 4Bb protein_coding Danio_rerio
ENSMUSG00000030064 Frmd4b FERM domain containing 4B protein_coding Mus_musculus

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