C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115159 GPD2 9606 + 2:156435290-156613735 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000310454 GPD2-001 156435441-156586403 protein_coding
  ENST00000409125 GPD2-201 156473572-156583228 protein_coding
  ENST00000409674 GPD2-003 156473572-156583058 protein_coding
  ENST00000409861 GPD2-012 156473572-156613735 nonsense_mediated_decay
  ENST00000415049 GPD2-008 156435290-156510849 protein_coding
  ENST00000416888 GPD2-005 156473572-156501844 nonsense_mediated_decay
  ENST00000430992 GPD2-006 156473592-156510834 nonsense_mediated_decay
  ENST00000438166 GPD2-002 156436389-156583058 protein_coding
  ENST00000464846 GPD2-011 156571172-156583009 retained_intron
  ENST00000492005 GPD2-009 156579083-156583048 processed_transcript
  ENST00000495851 GPD2-007 156436427-156501881 processed_transcript
  ENST00000496190 GPD2-010 156579686-156583273 processed_transcript
  ENST00000540309 GPD2-202 156436485-156583404 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000310454ENST00000409674ENST00000438166ENST00000464846ENST00000496190
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000310454 0.693±0.00 1.629±0.14 1.354±0.00 N/A 1.588±0.00 1.991±1.65 N/A 6.649±0.00 5.603±1.01 0.407±0.07 N/A
ENST00000409674 N/A N/A 1.729±0.00 N/A N/A 0.355±0.00 N/A 1.731±0.00 N/A N/A 3.031±0.00
ENST00000438166 N/A N/A 2.358±0.00 2.573±0.00 N/A N/A 1.929±0.00 N/A N/A 1.089±0.00 N/A
ENST00000464846 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.076±0.00 5.817±0.00
ENST00000496190 N/A N/A N/A N/A N/A 1.167±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007NB CIL_0007NB_0001 UCNEbase 2:155519661-157149592
CIL_0008JL CIL_0008JL_0001 VISTA 2:155834848-156435620
CIL_000759 CIL_000759_0001 CGP 2:156324432-156613735
CIL_0008JK CIL_0008JK_0001 VISTA 2:156394502-156995440
CIL_000756 CIL_000756_0001 CGP 2:156435290-157314211

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004368 IEA:TAS glycerol-3-phosphate dehydrogenase activity
GO:0005509 IEA calcium ion binding
GO:0005739 IEA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0006072 IEA glycerol-3-phosphate metabolic process
GO:0006094 IEA gluconeogenesis
GO:0009331 IEA glycerol-3-phosphate dehydrogenase complex
GO:0016491 IEA oxidoreductase activity
GO:0019563 IEA glycerol catabolic process
GO:0035264 IEA multicellular organism growth
GO:0043010 IEA camera-type eye development
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0052591 IEA sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062430 gpd2 glycerol-3-phosphate dehydrogenase 2 (mitochondrial) protein_coding Danio_rerio
ENSMUSG00000026827 Gpd2 glycerol phosphate dehydrogenase 2, mitochondrial protein_coding Mus_musculus

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