C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000310454 GPD2-001 ENSG00000115159 9606 + 2:156435441-156586403 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyMuscleOvaryPlacentaENST00000310454
Transcript ID Bladder Brain Breast Heart Kidney Muscle Ovary Placenta
ENST00000310454 0.693±0.00 1.629±0.14 1.354±0.00 1.588±0.00 1.991±1.65 6.649±0.00 5.603±1.01 0.407±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007NB CIL_0007NB_0001 UCNEbase 2:155519661-157149592
CIL_0008JL CIL_0008JL_0001 VISTA 2:155834848-156435620
CIL_000759 CIL_000759_0001 CGP 2:156324432-156613735
CIL_0008JK CIL_0008JK_0001 VISTA 2:156394502-156995440
CIL_000756 CIL_000756_0001 CGP 2:156435290-157314211

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004368 IEA:TAS glycerol-3-phosphate dehydrogenase activity
GO:0005509 IEA calcium ion binding
GO:0005739 IEA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0006072 IEA glycerol-3-phosphate metabolic process
GO:0006094 IEA gluconeogenesis
GO:0009331 IEA glycerol-3-phosphate dehydrogenase complex
GO:0016491 IEA oxidoreductase activity
GO:0019563 IEA glycerol catabolic process
GO:0035264 IEA multicellular organism growth
GO:0043010 IEA camera-type eye development
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0052591 IEA sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169687 Gpd2-202 protein_coding Mus_musculus 0 2529
ENSMUST00000028167 Gpd2-201 protein_coding Mus_musculus 0 2436
ENSMUST00000112618 Gpd2-001 protein_coding Mus_musculus 0 1951
ENSMUST00000141536 Gpd2-002 processed_transcript Mus_musculus 0 1408

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