C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008JL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs412 VISTA 9606 2:155834848-156435620
GeneTranscriptPositionBiotype
ENSG00000115159 (GPD2)
glycerol-3-phosphate dehydrogenase 2 (mitochondrial) 		ENST00000310454 (GPD2-001) 156435441-156586403 protein_coding
ENST00000409125 (GPD2-201) 156473572-156583228 protein_coding
ENST00000409674 (GPD2-003) 156473572-156583058 protein_coding
ENST00000409861 (GPD2-012) 156473572-156613735 nonsense_mediated_decay
ENST00000415049 (GPD2-008) 156435290-156510849 protein_coding
ENST00000416888 (GPD2-005) 156473572-156501844 nonsense_mediated_decay
ENST00000430992 (GPD2-006) 156473592-156510834 nonsense_mediated_decay
ENST00000438166 (GPD2-002) 156436389-156583058 protein_coding
ENST00000464846 (GPD2-011) 156571172-156583009 retained_intron
ENST00000492005 (GPD2-009) 156579083-156583048 processed_transcript
ENST00000495851 (GPD2-007) 156436427-156501881 processed_transcript
ENST00000496190 (GPD2-010) 156579686-156583273 processed_transcript
ENST00000540309 (GPD2-202) 156436485-156583404 protein_coding
ENSG00000153234 (NR4A2)
nuclear receptor subfamily 4, group A, member 2 		ENST00000339562 (NR4A2-001) 156324432-156332716 protein_coding
ENST00000406048 (NR4A2-007) 156327904-156330121 protein_coding
ENST00000409108 (NR4A2-009) 156325744-156330707 protein_coding
ENST00000409572 (NR4A2-010) 156325098-156342348 protein_coding
ENST00000417764 (NR4A2-011) 156325100-156330788 nonsense_mediated_decay
ENST00000417972 (NR4A2-006) 156325100-156331965 nonsense_mediated_decay
ENST00000421709 (NR4A2-004) 156329678-156332720 protein_coding
ENST00000424077 (NR4A2-005) 156329413-156332713 protein_coding
ENST00000426264 (NR4A2-003) 156325082-156332714 protein_coding
ENST00000429376 (NR4A2-008) 156325744-156330721 protein_coding
ENSG00000226383 (AC093375.1)
 ENST00000428651 (AC093375.1-002) 156020535-156024576 lincRNA
ENST00000448255 (AC093375.1-001) 156011617-156024613 lincRNA
ENSG00000235548 (AC073551.1)
 ENST00000450741 (AC073551.1-001) 156033247-156034080 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0008JL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs412 VISTA 10090 2:56616091-57216889
GeneTranscriptPositionBiotype
ENSMUSG00000026826 (Nr4a2)
nuclear receptor subfamily 4, group A, member 2 		ENSMUST00000028166 (Nr4a2-003) 57106830-57115038 protein_coding
ENSMUST00000112627 (Nr4a2-006) 57107499-57113072 protein_coding
ENSMUST00000112629 (Nr4a2-001) 57106830-57124003 protein_coding
ENSMUST00000128776 (Nr4a2-004) 57112990-57114373 processed_transcript
ENSMUST00000140165 (Nr4a2-005) 57112003-57115038 processed_transcript
ENSMUST00000183542 (Nr4a2-002) 57106830-57124003 nonsense_mediated_decay
ENSMUSG00000082004 (Gm13519)
predicted gene 13519 		ENSMUST00000120500 (Gm13519-001) 56853733-56854004 processed_pseudogene
ENSMUSG00000084938 (BB557941)
expressed sequence BB557941 		ENSMUST00000126549 (BB557941-001) 57127479-57181754 processed_transcript
ENSMUSG00000086396 (4930555B11Rik)
RIKEN cDNA 4930555B11 gene 		ENSMUST00000123210 (4930555B11Rik-001) 57181831-57188257 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008JL_0001ENSG00000115159ENST00000310454ENST00000409125ENST00000409674ENST00000409861ENST00000415049ENST00000416888ENST00000430992ENST00000438166ENST00000464846ENST00000492005ENST00000495851ENST00000496190ENST00000540309ENSG00000153234ENST00000339562ENST00000406048ENST00000409108ENST00000409572ENST00000417764ENST00000417972ENST00000421709ENST00000424077ENST00000426264ENST00000429376ENSG00000226383ENST00000428651ENST00000448255ENSG00000235548ENST00000450741CIL_0008JL_0002ENSMUSG00000026826ENSMUST00000028166ENSMUST00000112627ENSMUST00000112629ENSMUST00000128776ENSMUST00000140165ENSMUST00000183542ENSMUSG00000082004ENSMUST00000120500ENSMUSG00000084938ENSMUST00000126549ENSMUSG00000086396ENSMUST00000123210
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008JL_0001ENSG00000115159ENST00000310454ENST00000409674ENST00000438166ENST00000464846ENST00000496190ENSG00000153234ENST00000339562ENST00000409108ENST00000409572ENST00000417764ENST00000421709ENST00000424077ENST00000426264ENST00000429376ENSG00000226383ENST00000428651ENST00000448255ENSG00000235548ENST00000450741CIL_0008JL_0002ENSMUSG00000026826ENSMUST00000028166ENSMUST00000112627ENSMUST00000112629ENSMUST00000140165ENSMUST00000183542ENSMUSG00000082004ENSMUST00000120500ENSMUSG00000084938ENSMUST00000126549ENSMUSG00000086396ENSMUST00000123210
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115159 ENST00000310454 N/A N/A 0.693±0.00 1.629±0.14 1.354±0.00 N/A 1.588±0.00 1.991±1.65 N/A N/A 6.649±0.00 5.603±1.01 0.407±0.07 N/A
ENST00000409125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409674 N/A N/A N/A N/A 1.729±0.00 N/A N/A 0.355±0.00 N/A N/A 1.731±0.00 N/A N/A 3.031±0.00
ENST00000409861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438166 N/A N/A N/A N/A 2.358±0.00 2.573±0.00 N/A N/A 1.929±0.00 N/A N/A N/A 1.089±0.00 N/A
ENST00000464846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.076±0.00 5.817±0.00
ENST00000492005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496190 N/A N/A N/A N/A N/A N/A N/A 1.167±0.00 N/A N/A N/A N/A N/A N/A
ENST00000540309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000153234 ENST00000339562 3.887±0.00 0.300±0.00 N/A 0.676±0.00 4.296±0.00 1.309±0.00 2.319±0.00 N/A N/A 10.466±0.00 N/A 38.420±26.52 0.446±0.00 0.833±0.00
ENST00000406048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409108 3.146±0.00 N/A N/A N/A N/A N/A 0.171±0.00 N/A N/A N/A N/A N/A 0.253±0.00 1.020±0.00
ENST00000409572 N/A N/A 1.737±0.00 1.089±0.00 0.616±0.00 0.347±0.00 0.108±0.00 N/A N/A 3.050±2.35 1.320±0.85 N/A 0.096±0.00 1.756±0.00
ENST00000417764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.365±0.00 N/A
ENST00000417972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421709 N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 N/A N/A N/A N/A N/A N/A
ENST00000424077 N/A N/A N/A N/A N/A N/A N/A N/A 1.754±0.00 N/A N/A N/A N/A N/A
ENST00000426264 3.096±0.00 N/A N/A N/A N/A N/A 0.835±0.00 0.022±0.00 1.672±0.00 N/A 0.615±0.00 N/A N/A 1.834±0.00
ENST00000429376 N/A N/A N/A N/A N/A 0.458±0.00 N/A N/A N/A N/A 0.850±0.00 N/A 0.170±0.00 N/A
ENSG00000226383 ENST00000428651 N/A 0.019±0.00 0.106±0.00 0.085±0.07 N/A 0.056±0.00 0.052±0.03 0.167±0.00 N/A 0.030±0.00 N/A 0.149±0.12 0.022±0.01 0.087±0.01
ENST00000448255 0.066±0.00 0.085±0.00 N/A N/A 0.058±0.00 N/A 0.074±0.00 N/A N/A N/A N/A 0.096±0.00 0.072±0.03 0.188±0.00
ENSG00000235548 ENST00000450741 0.032±0.00 0.147±0.00 0.169±0.00 0.052±0.00 0.333±0.32 0.195±0.10 0.031±0.00 N/A 0.169±0.15 0.030±0.00 N/A 0.033±0.01 N/A 0.133±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026826 ENSMUST00000028166 0.574±0.11 2.010±0.54 0.297±0.01 2.547±0.57 0.197±0.11 0.570±0.19 N/A 0.125±0.03 0.083±0.00 0.565±0.23 N/A 0.338±0.13 0.151±0.07 N/A
ENSMUST00000112627 0.169±0.00 1.006±0.27 N/A N/A 0.213±0.07 0.822±0.25 0.103±0.00 0.177±0.02 0.019±0.01 N/A 0.104±0.04 0.261±0.00 0.106±0.02 0.073±0.00
ENSMUST00000112629 0.479±0.24 1.122±0.34 0.313±0.06 1.102±0.00 0.317±0.18 0.484±0.15 0.238±0.10 0.106±0.03 0.155±0.06 0.352±0.10 0.144±0.05 0.615±0.16 0.121±0.04 0.245±0.03
ENSMUST00000128776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140165 0.420±0.00 N/A N/A N/A 0.568±0.00 N/A 0.190±0.12 0.224±0.13 0.099±0.03 N/A 0.167±0.02 N/A N/A 0.038±0.00
ENSMUST00000183542 N/A 1.000±0.35 N/A N/A 0.472±0.00 0.529±0.00 N/A N/A N/A 0.238±0.00 0.122±0.00 0.541±0.21 N/A N/A
ENSMUSG00000082004 ENSMUST00000120500 1.428±0.71 N/A 0.481±0.13 0.546±0.20 1.099±0.67 N/A N/A N/A 0.148±0.09 0.688±0.34 0.335±0.00 2.036±1.50 1.724±1.72 N/A
ENSMUSG00000084938 ENSMUST00000126549 0.042±0.00 N/A 0.030±0.00 0.099±0.02 N/A 0.639±0.00 N/A 0.112±0.05 0.032±0.02 N/A 0.026±0.01 0.343±0.21 0.058±0.03 1.556±0.18
ENSMUSG00000086396 ENSMUST00000123210 N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A 0.004±0.00 N/A N/A N/A 0.012±0.00 0.428±0.02

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