C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear receptor binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115216 NRBP1 9606 + 2:27427790-27442259 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000233557 NRBP1-001 27427790-27442259 protein_coding
  ENST00000356442 NRBP1-007 27431677-27433707 protein_coding
  ENST00000379852 NRBP1-002 27428640-27442255 protein_coding
  ENST00000379863 NRBP1-003 27428653-27442255 protein_coding
  ENST00000419281 NRBP1-006 27429183-27434500 protein_coding
  ENST00000460499 NRBP1-004 27435582-27442255 retained_intron
  ENST00000486701 NRBP1-010 27440315-27441501 retained_intron
  ENST00000493746 NRBP1-008 27434471-27436011 retained_intron
  ENST00000493768 NRBP1-009 27434045-27435169 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000233557ENST00000356442ENST00000379852ENST00000379863ENST00000419281
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000233557 N/A N/A 1.649±0.00 1.828±0.00 N/A N/A 1.145±0.00 1.361±0.00 3.161±0.00 1.953±0.00 1.348±0.00 N/A N/A N/A
ENST00000356442 N/A N/A N/A N/A N/A 9.877±0.00 6.132±0.00 N/A N/A N/A 14.890±0.00 11.013±0.00 N/A N/A
ENST00000379852 34.336±0.00 36.869±0.00 1.205±0.00 14.867±8.45 16.724±12.55 19.251±14.51 10.465±7.79 18.406±14.16 14.312±5.59 21.722±13.37 26.248±23.59 37.652±22.15 85.358±15.70 62.900±11.94
ENST00000379863 N/A N/A N/A 5.494±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.058±0.00 46.251±0.00 50.453±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012H CIL_00012H_0001 CGP 2:27427790-27446481

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005654 TAS nucleoplasm
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0006468 IEA protein phosphorylation
GO:0006888 IDA ER to Golgi vesicle-mediated transport
GO:0008152 IEA metabolic process
GO:0010467 TAS gene expression
GO:0012505 IDA endomembrane system
GO:0016020 IEA membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0042802 IEA identical protein binding
GO:0042803 ISS protein homodimerization activity
GO:0042995 IEA cell projection
GO:0048471 IEA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056089 nrbp1 nuclear receptor binding protein 1 protein_coding Danio_rerio
ENSMUSG00000029148 Nrbp1 nuclear receptor binding protein 1 protein_coding Mus_musculus

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