C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear receptor binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029148 Nrbp1 10090 + 5:31240864-31251566 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031034 Nrbp1-001 31240864-31251566 protein_coding
  ENSMUST00000078312 Nrbp1-002 31240864-31251560 protein_coding
  ENSMUST00000127415 Nrbp1-011 31250345-31251449 retained_intron
  ENSMUST00000131493 Nrbp1-010 31249591-31250733 retained_intron
  ENSMUST00000139602 Nrbp1-006 31240932-31247914 protein_coding
  ENSMUST00000141973 Nrbp1-007 31240895-31245835 retained_intron
  ENSMUST00000142646 Nrbp1-009 31247423-31249981 retained_intron
  ENSMUST00000148107 Nrbp1-008 31243428-31244436 retained_intron
  ENSMUST00000150101 Nrbp1-003 31249355-31251563 retained_intron
  ENSMUST00000152534 Nrbp1-005 31240903-31244882 protein_coding
  ENSMUST00000155934 Nrbp1-004 31240877-31244961 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031034ENSMUST00000078312ENSMUST00000127415ENSMUST00000139602ENSMUST00000150101ENSMUST00000152534
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031034 53.879±7.46 42.896±2.30 45.364±5.75 31.744±3.64 40.715±8.75 40.103±4.24 39.550±3.75 31.569±1.52 26.152±2.59 43.131±1.60 19.580±2.64 54.009±14.58 45.655±18.11 18.609±7.28
ENSMUST00000078312 N/A N/A N/A 19.499±0.97 N/A N/A N/A N/A N/A N/A 3.700±0.24 N/A N/A N/A
ENSMUST00000127415 N/A 53.854±3.37 N/A N/A 42.935±4.31 40.700±10.61 N/A 16.554±2.97 16.533±2.53 27.338±5.57 N/A 55.890±8.13 N/A N/A
ENSMUST00000139602 N/A N/A N/A 21.526±0.00 N/A N/A N/A N/A N/A N/A N/A 24.736±0.00 30.609±0.65 14.665±0.00
ENSMUST00000150101 N/A N/A N/A N/A 8.639±0.00 9.640±1.58 N/A N/A N/A 9.477±1.27 N/A N/A N/A N/A
ENSMUST00000152534 N/A N/A N/A 72.028±0.00 N/A N/A N/A N/A N/A N/A N/A 120.670±0.00 148.241±35.46 71.940±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012H CIL_00012H_0002 CGP 5:31240864-31253202

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004674 ISO protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0006888 ISS ER to Golgi vesicle-mediated transport
GO:0012505 ISO endomembrane system
GO:0016020 IEA membrane
GO:0042802 IPI identical protein binding
GO:0042803 IDA protein homodimerization activity
GO:0042995 IEA cell projection
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056089 nrbp1 nuclear receptor binding protein 1 protein_coding Danio_rerio
ENSG00000115216 NRBP1 nuclear receptor binding protein 1 protein_coding Homo_sapiens

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