C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379852 NRBP1-002 ENSG00000115216 9606 + 2:27428640-27442255 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379852
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379852 34.336±0.00 36.869±0.00 1.205±0.00 14.867±8.45 16.724±12.55 19.251±14.51 10.465±7.79 18.406±14.16 14.312±5.59 21.722±13.37 26.248±23.59 37.652±22.15 85.358±15.70 62.900±11.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012H CIL_00012H_0001 CGP 2:27427790-27446481

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005654 TAS nucleoplasm
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0006468 IEA protein phosphorylation
GO:0006888 IDA ER to Golgi vesicle-mediated transport
GO:0008152 IEA metabolic process
GO:0010467 TAS gene expression
GO:0012505 IDA endomembrane system
GO:0016020 IEA membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0042803 ISS protein homodimerization activity
GO:0042995 IEA cell projection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031034 Nrbp1-001 protein_coding Mus_musculus 0 2996
ENSMUST00000078312 Nrbp1-002 protein_coding Mus_musculus 0 2874
ENSMUST00000139602 Nrbp1-006 protein_coding Mus_musculus 0 1098
ENSMUST00000141973 Nrbp1-007 retained_intron Mus_musculus 0 695
ENSMUST00000150101 Nrbp1-003 retained_intron Mus_musculus 0 684
ENSMUST00000127415 Nrbp1-011 retained_intron Mus_musculus 0 603
ENSMUST00000155934 Nrbp1-004 protein_coding Mus_musculus 0 599
ENSMUST00000152534 Nrbp1-005 protein_coding Mus_musculus 0 568
ENSMUST00000148107 Nrbp1-008 retained_intron Mus_musculus 0 545
ENSMUST00000142646 Nrbp1-009 retained_intron Mus_musculus 0 455
ENSMUST00000131493 Nrbp1-010 retained_intron Mus_musculus 0 361
ENSDART00000041146 nrbp2-201 protein_coding Danio_rerio 0 353
ENSDART00000135293 nrbp2-001 protein_coding Danio_rerio 0 351
ENSDART00000141456 nrbp2-002 processed_transcript Danio_rerio 0 211
ENSMUST00000068997 Gm9970-201 protein_coding Mus_musculus 4e-35 154

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