C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: receptor accessory protein 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115255 REEP6 9606 + 19:1490747-1497927 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000233596 REEP6-001 1490747-1497927 protein_coding
  ENST00000395479 REEP6-003 1495363-1497498 protein_coding
  ENST00000395484 REEP6-004 1495476-1497721 nonsense_mediated_decay
  ENST00000591735 REEP6-002 1491166-1496181 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000233596ENST00000395479ENST00000395484ENST00000591735
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000233596 4.681±0.00 2.392±0.00 0.509±0.00 4.332±4.11 9.467±9.23 0.995±0.61 0.781±0.00 20.469±9.99 119.217±118.97 0.231±0.18 0.621±0.00 9.298±6.37 4.319±1.20 173.988±33.49
ENST00000395479 N/A N/A N/A 4.170±0.00 N/A 1.458±0.00 0.580±0.00 N/A N/A 0.920±0.00 0.403±0.00 N/A 2.111±0.00 N/A
ENST00000395484 N/A N/A 0.637±0.00 N/A N/A 0.399±0.00 0.616±0.00 N/A N/A 1.368±0.00 N/A N/A N/A N/A
ENST00000591735 N/A N/A N/A N/A 0.678±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZH CIL_0000ZH_0001 CGP 19:1461143-1490752
CIL_00066P CIL_00066P_0001 CGP 19:1481428-1497927
CIL_0000ZJ CIL_0000ZJ_0001 CGP 19:1490747-1513604

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005789 IEA endoplasmic reticulum membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0032386 IEA regulation of intracellular transport
GO:0044317 IEA rod spherule
GO:0045177 IEA apical part of cell

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042965 reep6 receptor accessory protein 6 protein_coding Danio_rerio
ENSDARG00000087349 reep6 receptor accessory protein 6 protein_coding Danio_rerio
ENSMUSG00000035504 Reep6 receptor accessory protein 6 protein_coding Mus_musculus

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