C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: receptor accessory protein 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035504 Reep6 10090 + 10:80329953-80336441 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040081 Reep6-003 80330202-80335582 protein_coding
  ENSMUST00000105354 Reep6-005 80329953-80336441 protein_coding
  ENSMUST00000105355 Reep6-006 80329953-80336441 protein_coding
  ENSMUST00000105357 Reep6-002 80329953-80336441 protein_coding
  ENSMUST00000105358 Reep6-001 80329953-80336441 protein_coding
  ENSMUST00000153167 Reep6-004 80330198-80334432 retained_intron
  ENSMUST00000186864 Reep6-201 80330145-80336440 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040081ENSMUST00000105355ENSMUST00000105357ENSMUST00000153167ENSMUST00000186864
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.597±0.00 N/A 1.516±0.00 N/A
ENSMUST00000105355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.088±0.00 N/A
ENSMUST00000105357 12.161±3.04 2.055±0.70 5.351±2.23 0.224±0.00 7.512±3.28 10.538±1.14 0.425±0.18 8.205±0.77 81.408±62.76 8.431±0.65 0.489±0.15 2.677±0.99 13.625±7.10 N/A
ENSMUST00000153167 N/A N/A N/A 0.991±0.00 5.005±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186864 N/A 2.100±1.03 N/A 1.715±0.75 2.838±0.00 2.090±0.02 0.664±0.20 1.425±0.29 44.908±16.00 N/A 1.094±0.18 0.793±0.34 1.922±0.00 243.661±61.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066P CIL_00066P_0002 CGP 10:80321283-80336441
CIL_0000ZJ CIL_0000ZJ_0002 CGP 10:80329953-80348412

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005789 IDA endoplasmic reticulum membrane
GO:0016021 IEA integral component of membrane
GO:0032386 IDA regulation of intracellular transport
GO:0044317 IDA rod spherule
GO:0045177 IDA apical part of cell

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042965 reep6 receptor accessory protein 6 protein_coding Danio_rerio
ENSDARG00000087349 reep6 receptor accessory protein 6 protein_coding Danio_rerio
ENSG00000115255 REEP6 receptor accessory protein 6 protein_coding Homo_sapiens

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