C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: striatin, calmodulin binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115808 STRN 9606 - 2:36843640-36966472 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263918 STRN-001 36843640-36966472 protein_coding
  ENST00000379213 STRN-201 36849406-36966471 protein_coding
  ENST00000495595 STRN-002 36869703-36902928 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000263918ENST00000379213ENST00000495595
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000263918 4.741±0.00 1.087±0.00 1.979±0.00 4.639±0.51 3.144±0.21 1.824±0.26 3.811±0.94 N/A 1.699±0.60 0.621±0.00 2.680±1.24 0.864±0.46 1.666±0.46
ENST00000379213 N/A N/A 1.166±0.00 N/A N/A 3.277±0.00 3.225±0.47 N/A 2.037±0.00 1.915±0.00 4.796±0.00 0.858±0.00 1.371±0.00
ENST00000495595 N/A N/A N/A 8.861±0.00 N/A N/A 2.944±0.00 1.670±0.00 N/A N/A N/A N/A 1.604±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MU CIL_0000MU_0001 CGP 2:36696690-36966472
CIL_0000MV CIL_0000MV_0001 CGP 2:36843640-37084342

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000159 IDA protein phosphatase type 2A complex
GO:0005515 IPI:IEA protein binding
GO:0005516 ISS calmodulin binding
GO:0005737 IEA cytoplasm
GO:0005923 IDA tight junction
GO:0007626 ISS locomotory behavior
GO:0008285 IMP negative regulation of cell proliferation
GO:0014069 ISS postsynaptic density
GO:0016020 ISS membrane
GO:0016055 IMP Wnt signaling pathway
GO:0016358 ISS dendrite development
GO:0030331 IPI estrogen receptor binding
GO:0032403 IDA protein complex binding
GO:0043025 ISS neuronal cell body
GO:0043197 ISS dendritic spine
GO:0045211 ISS postsynaptic membrane
GO:0051721 IDA protein phosphatase 2A binding
GO:0070016 IPI armadillo repeat domain binding
GO:0070830 NAS tight junction assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060595 STRN striatin, calmodulin binding protein protein_coding Danio_rerio
ENSMUSG00000024077 Strn striatin, calmodulin binding protein protein_coding Mus_musculus

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