C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: striatin, calmodulin binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024077 Strn 10090 - 17:78649913-78737196 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024881 Strn-002 78654596-78688817 protein_coding
  ENSMUST00000145480 Strn-003 78667196-78684352 protein_coding
  ENSMUST00000145910 Strn-001 78649913-78737196 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024881ENSMUST00000145480ENSMUST00000145910
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024881 2.820±0.85 2.198±0.61 N/A N/A 2.644±0.76 3.759±0.37 1.149±0.14 1.505±0.62 1.268±0.00 2.886±0.19 N/A 7.096±1.88 2.258±0.13 2.723±0.34
ENSMUST00000145480 N/A N/A N/A 24.628±0.00 N/A N/A N/A N/A N/A N/A N/A 18.125±0.00 12.169±0.00 2.777±0.00
ENSMUST00000145910 1.438±0.32 3.539±0.64 2.987±0.82 2.689±0.86 1.945±1.04 2.699±0.89 1.928±0.83 1.752±0.62 1.574±0.60 3.076±0.72 0.637±0.17 6.119±0.94 3.840±1.16 1.198±0.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MU CIL_0000MU_0002 CGP 17:78508063-78737196
CIL_0000MV CIL_0000MV_0002 CGP 17:78649913-78835381

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000159 IEA protein phosphatase type 2A complex
GO:0005516 IEA calmodulin binding
GO:0005737 IEA cytoplasm
GO:0005923 IEA tight junction
GO:0008285 IEA negative regulation of cell proliferation
GO:0016020 IEA membrane
GO:0016055 IEA Wnt signaling pathway
GO:0030331 IEA estrogen receptor binding
GO:0032403 IEA protein complex binding
GO:0042995 IEA cell projection
GO:0051721 IEA protein phosphatase 2A binding
GO:0070016 IEA armadillo repeat domain binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060595 STRN striatin, calmodulin binding protein protein_coding Danio_rerio
ENSG00000115808 STRN striatin, calmodulin binding protein protein_coding Homo_sapiens

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