C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lactase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115850 LCT 9606 - 2:135787840-135837180 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264162 LCT-001 135787840-135837180 protein_coding
  ENST00000452974 LCT-002 135794337-135812959 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartMuscleOvaryTestisENST00000264162ENST00000452974
Transcript ID Adrenal Brain Breast Colon Heart Muscle Ovary Testis
ENST00000264162 N/A 0.003±0.00 0.008±0.00 0.035±0.00 0.031±0.00 0.015±0.00 0.014±0.00 0.052±0.01
ENST00000452974 0.026±0.00 N/A N/A 0.005±0.00 N/A 0.210±0.00 0.008±0.00 0.040±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NN CIL_0003NN_0001 CGP 2:135741619-135837180
CIL_0006VU CIL_0006VU_0001 CGP 2:135787840-135876426

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000016 TAS lactase activity
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0005975 TAS:IEA carbohydrate metabolic process
GO:0016020 TAS membrane
GO:0017042 IEA glycosylceramidase activity
GO:0044245 TAS polysaccharide digestion
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060671 SI:DKEY-79P17.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092404 lct lactase protein_coding Danio_rerio
ENSMUSG00000026354 Lct lactase protein_coding Mus_musculus

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