C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lactase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264162 LCT-001 ENSG00000115850 9606 - 2:135787840-135837180 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartMuscleOvaryTestisENST00000264162
Transcript ID Brain Breast Colon Heart Muscle Ovary Testis
ENST00000264162 0.003±0.00 0.008±0.00 0.035±0.00 0.031±0.00 0.015±0.00 0.014±0.00 0.052±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NN CIL_0003NN_0001 CGP 2:135741619-135837180
CIL_0006VU CIL_0006VU_0001 CGP 2:135787840-135876426

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000016 TAS lactase activity
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0005975 TAS:IEA carbohydrate metabolic process
GO:0016020 TAS membrane
GO:0017042 IEA glycosylceramidase activity
GO:0044245 TAS polysaccharide digestion
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073490 Lct-001 protein_coding Mus_musculus 0 4460
ENSMUST00000162067 Lct-002 retained_intron Mus_musculus 0 457
ENSDART00000085738 SI:DKEY-79P17.2-201 protein_coding Danio_rerio 0 235

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