C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WAS/WASL interacting protein family, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115935 WIPF1 9606 - 2:174559572-174682916 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000272746 WIPF1-004 174560770-174682899 protein_coding
  ENST00000359761 WIPF1-006 174562204-174682883 protein_coding
  ENST00000392546 WIPF1-002 174562211-174598206 protein_coding
  ENST00000392547 WIPF1-001 174559572-174634579 protein_coding
  ENST00000409415 WIPF1-003 174571169-174682871 protein_coding
  ENST00000409891 WIPF1-005 174566161-174597765 protein_coding
  ENST00000410117 WIPF1-016 174574730-174597769 protein_coding
  ENST00000436221 WIPF1-014 174575263-174598211 protein_coding
  ENST00000455428 WIPF1-017 174572324-174585589 protein_coding
  ENST00000467149 WIPF1-019 174567077-174570646 processed_transcript
  ENST00000469002 WIPF1-018 174673267-174682847 processed_transcript
  ENST00000470752 WIPF1-010 174623481-174634605 processed_transcript
  ENST00000474332 WIPF1-013 174625624-174630429 retained_intron
  ENST00000480400 WIPF1-015 174581140-174597804 retained_intron
  ENST00000487291 WIPF1-009 174676337-174682916 processed_transcript
  ENST00000488830 WIPF1-012 174625710-174634536 retained_intron
  ENST00000490887 WIPF1-011 174625857-174634579 processed_transcript
  ENST00000610916 WIPF1-201 174566161-174597765 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000272746ENST00000359761ENST00000392547ENST00000409415
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000272746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.850±0.00 1.139±0.00 2.922±0.00 N/A
ENST00000359761 N/A N/A N/A N/A N/A N/A 0.536±0.00 N/A N/A 31.243±0.00 N/A N/A N/A N/A
ENST00000392547 16.595±0.00 18.312±0.00 N/A 6.561±5.84 9.064±0.00 17.311±0.00 0.301±0.00 3.755±2.99 1.987±0.86 3.820±0.00 1.729±0.00 2.973±2.73 6.188±0.27 5.010±3.70
ENST00000409415 N/A N/A 1.394±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096H CIL_00096H_0001 VISTA 2:174031315-174632386
CIL_0008GI CIL_0008GI_0001 VISTA 2:174038535-174640167
CIL_0008K2 CIL_0008K2_0001 VISTA 2:174042582-174643514
CIL_00063W CIL_00063W_0003 CGP 2:174431571-174682916
CIL_0001H9 CIL_0001H9_0001 CGP 2:174559572-174764472

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005522 TAS profilin binding
GO:0005829 TAS cytosol
GO:0005884 IEA actin filament
GO:0006461 TAS protein complex assembly
GO:0008154 IEA actin polymerization or depolymerization
GO:0015629 TAS actin cytoskeleton
GO:0030048 IEA actin filament-based movement
GO:0031410 IEA cytoplasmic vesicle
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0042995 IEA cell projection
GO:0045087 TAS innate immune response
GO:0051707 IEA response to other organism

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038458 WIPF1 (1 of 2) WAS/WASL interacting protein family, member 1 protein_coding Danio_rerio
ENSDARG00000071084 wipf1 WAS/WASL interacting protein family, member 1 protein_coding Danio_rerio
ENSMUSG00000075284 Wipf1 WAS/WASL interacting protein family, member 1 protein_coding Mus_musculus

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