C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WAS/WASL interacting protein family, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392547 WIPF1-001 ENSG00000115935 9606 - 2:174559572-174634579 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392547
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392547 16.595±0.00 18.312±0.00 6.561±5.84 9.064±0.00 17.311±0.00 0.301±0.00 3.755±2.99 1.987±0.86 3.820±0.00 1.729±0.00 2.973±2.73 6.188±0.27 5.010±3.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096H CIL_00096H_0001 VISTA 2:174031315-174632386
CIL_0008GI CIL_0008GI_0001 VISTA 2:174038535-174640167
CIL_0008K2 CIL_0008K2_0001 VISTA 2:174042582-174643514
CIL_00063W CIL_00063W_0003 CGP 2:174431571-174682916
CIL_0001H9 CIL_0001H9_0001 CGP 2:174559572-174764472

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005522 TAS profilin binding
GO:0005829 TAS cytosol
GO:0005884 IEA actin filament
GO:0006461 TAS protein complex assembly
GO:0008154 IEA actin polymerization or depolymerization
GO:0015629 TAS actin cytoskeleton
GO:0030048 IEA actin filament-based movement
GO:0031410 IEA cytoplasmic vesicle
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0042995 IEA cell projection
GO:0045087 TAS innate immune response
GO:0051707 IEA response to other organism

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102679 Wipf1-003 protein_coding Mus_musculus 0 1428
ENSMUST00000102680 Wipf1-002 protein_coding Mus_musculus 0 1428
ENSMUST00000094681 Wipf1-001 protein_coding Mus_musculus 0 1428
ENSMUST00000141264 Wipf1-006 protein_coding Mus_musculus 0 669
ENSMUST00000151939 Wipf1-007 protein_coding Mus_musculus 0 252

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