C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: origin recognition complex, subunit 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115947 ORC4 9606 - 2:147930397-148021604 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264169 ORC4-201 147930397-148021604 protein_coding
  ENST00000392857 ORC4-001 147930399-148020723 protein_coding
  ENST00000416719 ORC4-002 147955347-148021565 protein_coding
  ENST00000440042 ORC4-003 147958303-148020760 protein_coding
  ENST00000457954 ORC4-006 147958301-148020724 protein_coding
  ENST00000461711 ORC4-005 147948189-148020761 processed_transcript
  ENST00000478904 ORC4-008 147948051-147958495 retained_intron
  ENST00000481488 ORC4-010 147937977-147938650 retained_intron
  ENST00000483608 ORC4-012 147947675-147952513 retained_intron
  ENST00000488761 ORC4-011 147936313-147938180 processed_transcript
  ENST00000490200 ORC4-004 147952472-148020763 processed_transcript
  ENST00000495601 ORC4-007 147958592-148020726 retained_intron
  ENST00000496670 ORC4-009 147951448-147972829 processed_transcript
  ENST00000535373 ORC4-202 147930397-148020747 protein_coding
  ENST00000536575 ORC4-203 147930397-148020761 protein_coding
  ENST00000540442 ORC4-204 147930397-148020737 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392857ENST00000478904ENST00000535373ENST00000536575ENST00000540442
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392857 2.081±0.00 3.728±0.00 6.246±0.90 3.489±0.27 2.042±0.57 3.186±0.17 3.275±2.00 3.044±2.38 2.964±1.28 1.625±0.00 4.535±0.51 2.098±0.51 3.952±0.00
ENST00000478904 N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.507±0.00 N/A N/A N/A
ENST00000535373 N/A N/A N/A N/A 2.731±0.00 N/A N/A N/A N/A N/A 2.051±0.00 N/A N/A
ENST00000536575 N/A N/A N/A N/A N/A N/A N/A 1.127±0.00 N/A N/A N/A N/A N/A
ENST00000540442 N/A N/A N/A N/A 2.006±0.00 N/A 3.280±0.00 N/A N/A N/A 6.208±0.00 1.405±0.00 7.143±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GY CIL_0007GY_0001 CGP 2:144388001-147930826
CIL_0006MB CIL_0006MB_0001 CGP 2:147844517-148021604
CIL_0006MC CIL_0006MC_0001 CGP 2:147930397-148518236

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000166 IDA nucleotide binding
GO:0000278 TAS mitotic cell cycle
GO:0000808 IDA:IEA origin recognition complex
GO:0003677 IEA DNA binding
GO:0003688 IMP DNA replication origin binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005664 IDA nuclear origin of replication recognition complex
GO:0006260 TAS:IEA DNA replication
GO:0006270 IMP DNA replication initiation
GO:0006810 IEA transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029014 orc4 origin recognition complex, subunit 4 protein_coding Danio_rerio
ENSMUSG00000026761 Orc4 origin recognition complex, subunit 4 protein_coding Mus_musculus

Loading