C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: origin recognition complex, subunit 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026761 Orc4 10090 - 2:48902824-48950277 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028098 Orc4-001 48902824-48949276 protein_coding
  ENSMUST00000090976 Orc4-002 48931958-48949234 protein_coding
  ENSMUST00000123271 Orc4-005 48936844-48950277 protein_coding
  ENSMUST00000123789 Orc4-009 48929626-48940365 processed_transcript
  ENSMUST00000123809 Orc4-007 48936477-48949232 processed_transcript
  ENSMUST00000128618 Orc4-012 48905414-48912575 processed_transcript
  ENSMUST00000141441 Orc4-003 48911404-48949234 processed_transcript
  ENSMUST00000142851 Orc4-008 48917205-48950039 protein_coding
  ENSMUST00000149679 Orc4-006 48936773-48949241 protein_coding
  ENSMUST00000150492 Orc4-011 48905379-48910668 processed_transcript
  ENSMUST00000153150 Orc4-010 48933153-48934202 processed_transcript
  ENSMUST00000154784 Orc4-004 48905316-48949231 processed_transcript
  ENSMUST00000156956 Orc4-013 48904880-48910013 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000028098ENSMUST00000141441ENSMUST00000142851ENSMUST00000154784
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000028098 3.811±0.50 7.881±0.77 16.595±3.03 2.869±0.17 3.117±0.25 2.996±0.67 3.992±1.88 5.084±0.77 2.730±0.17 5.257±0.05 6.657±2.43
ENSMUST00000141441 N/A N/A 15.833±0.00 N/A N/A N/A 4.929±0.00 N/A N/A 13.896±5.90 N/A
ENSMUST00000142851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.429±1.58
ENSMUST00000154784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.556±2.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GY CIL_0007GY_0002 CGP 2:44983634-48903269
CIL_0006MB CIL_0006MB_0002 CGP 2:48814109-48950277
CIL_0006MC CIL_0006MC_0002 CGP 2:48902824-49322284

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003688 IEA DNA replication origin binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005664 ISS nuclear origin of replication recognition complex
GO:0006260 TAS DNA replication
GO:0006270 IEA DNA replication initiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029014 orc4 origin recognition complex, subunit 4 protein_coding Danio_rerio
ENSG00000115947 ORC4 origin recognition complex, subunit 4 protein_coding Homo_sapiens

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