C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ral GEF with PH domain and SH3 binding motif 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000116191 RALGPS2 9606 + 1:178725147-178921841 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324778 RALGPS2-003 178725396-178883533 protein_coding
  ENST00000367632 RALGPS2-005 178886079-178906811 protein_coding
  ENST00000367634 RALGPS2-201 178725147-178921841 protein_coding
  ENST00000367635 RALGPS2-002 178725165-178920103 protein_coding
  ENST00000415888 RALGPS2-004 178878945-178885621 protein_coding
  ENST00000477383 RALGPS2-007 178877540-178893991 processed_transcript
  ENST00000478871 RALGPS2-008 178893838-178916375 retained_intron
  ENST00000480743 RALGPS2-006 178885977-178894325 retained_intron
  ENST00000495034 RALGPS2-001 178725165-178879788 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000367634ENST00000367635
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000367634 0.533±0.00 3.743±0.00 N/A 0.453±0.00 2.437±0.00 1.212±0.14 0.460±0.00 3.330±0.00 N/A 3.091±0.00 1.312±0.53 0.791±0.00 5.128±0.30
ENST00000367635 0.292±0.00 N/A 0.747±0.00 N/A 2.463±0.00 2.669±0.00 0.733±0.04 N/A 0.885±0.17 0.421±0.00 2.180±1.51 0.611±0.20 12.281±5.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WH CIL_0001WH_0002 CGP 1:178725147-178921841

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026519 ralgps2 Ral-A exchange factor RalGPS2 protein_coding Danio_rerio
ENSMUSG00000026594 Ralgps2 Ral GEF with PH domain and SH3 binding motif 2 protein_coding Mus_musculus

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