C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001WH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000026519-ENSDARG00000026519 CGP 7955 20:15973492-16196883
GeneTranscriptPositionBiotype
ENSDARG00000012071 (angptl1)
angiopoietin-like 1 		ENSDART00000020999 (angptl1-001) 16022946-16048100 protein_coding
ENSDART00000121675 (angptl1-201) 16023213-16047294 protein_coding
ENSDART00000125261 (angptl1-202) 16037756-16047801 protein_coding
ENSDARG00000026519 (ralgps2)
Ral-A exchange factor RalGPS2 		ENSDART00000021550 (ralgps2-201) 15978185-16196810 protein_coding
ENSDART00000037420 (ralgps2-001) 15973492-16196883 protein_coding
ENSDART00000127622 (ralgps2-202) 15973494-16119229 protein_coding
CIL_0001WH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000116191-ENSG00000116191 CGP 9606 1:178725147-178921841
GeneTranscriptPositionBiotype
ENSG00000116194 (ANGPTL1)
angiopoietin-like 1 		ENST00000234816 (ANGPTL1-001) 178849705-178871052 protein_coding
ENST00000367629 (ANGPTL1-003) 178850624-178871022 protein_coding
ENST00000444255 (ANGPTL1-002) 178865434-178869278 protein_coding
ENSG00000228196 (PTPN2P1)
protein tyrosine phosphatase, non-receptor type 2 pseudogene 1 		ENST00000423212 (PTPN2P1-001) 178746683-178747754 processed_pseudogene
CIL_0001WH_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026594-ENSMUSG00000026594 CGP 10090 1:156804166-156939626
GeneTranscriptPositionBiotype
ENSMUSG00000026594 (Ralgps2)
Ral GEF with PH domain and SH3 binding motif 2 		ENSMUST00000027886 (Ralgps2-007) 156806760-156939543 protein_coding
ENSMUST00000063199 (Ralgps2-008) 156808116-156939531 protein_coding
ENSMUST00000171292 (Ralgps2-009) 156807710-156939387 protein_coding
ENSMUST00000172057 (Ralgps2-001) 156804166-156939602 protein_coding
ENSMUST00000185198 (Ralgps2-005) 156813081-156939626 protein_coding
ENSMUST00000185970 (Ralgps2-015) 156828552-156832691 retained_intron
ENSMUST00000188656 (Ralgps2-010) 156818896-156938818 protein_coding
ENSMUST00000189208 (Ralgps2-012) 156808830-156813568 retained_intron
ENSMUST00000189316 (Ralgps2-006) 156816524-156939567 protein_coding
ENSMUST00000189648 (Ralgps2-014) 156900598-156938781 protein_coding
ENSMUST00000190648 (Ralgps2-003) 156818877-156939593 protein_coding
ENSMUST00000190762 (Ralgps2-013) 156887093-156939134 protein_coding
ENSMUST00000191503 (Ralgps2-011) 156828498-156830847 retained_intron
ENSMUST00000191605 (Ralgps2-004) 156808122-156939608 protein_coding
ENSMUSG00000033544 (Angptl1)
angiopoietin-like 1 		ENSMUST00000027885 (Angptl1-001) 156838562-156861078 protein_coding
ENSMUST00000111720 (Angptl1-002) 156838942-156845615 protein_coding
ENSMUSG00000101964 (RP24-444I15.5)
predicted gene 28693 		ENSMUST00000189622 (RP24-444I15.5-002) 156835287-156837924 processed_transcript
ENSMUST00000190758 (RP24-444I15.5-001) 156835609-156835939 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001WH_0001ENSDARG00000012071ENSDART00000020999ENSDART00000121675ENSDART00000125261ENSDARG00000026519ENSDART00000021550ENSDART00000037420ENSDART00000127622CIL_0001WH_0002ENSG00000116194ENST00000234816ENST00000367629ENST00000444255ENSG00000228196ENST00000423212CIL_0001WH_0003ENSMUSG00000026594ENSMUST00000027886ENSMUST00000063199ENSMUST00000171292ENSMUST00000172057ENSMUST00000185198ENSMUST00000185970ENSMUST00000188656ENSMUST00000189208ENSMUST00000189316ENSMUST00000189648ENSMUST00000190648ENSMUST00000190762ENSMUST00000191503ENSMUST00000191605ENSMUSG00000033544ENSMUST00000027885ENSMUST00000111720ENSMUSG00000101964ENSMUST00000189622ENSMUST00000190758
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001WH_0001ENSDARG00000012071ENSDART00000020999ENSDART00000121675ENSDART00000125261ENSDARG00000026519ENSDART00000021550ENSDART00000037420ENSDART00000127622CIL_0001WH_0002ENSG00000116194ENST00000234816ENST00000367629ENST00000444255ENSG00000228196ENST00000423212CIL_0001WH_0003ENSMUSG00000026594ENSMUST00000027886ENSMUST00000063199ENSMUST00000171292ENSMUST00000172057ENSMUST00000185198ENSMUST00000185970ENSMUST00000189208ENSMUST00000189648ENSMUST00000190648ENSMUST00000191605ENSMUSG00000033544ENSMUST00000027885ENSMUST00000111720ENSMUSG00000101964ENSMUST00000189622ENSMUST00000190758
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012071 ENSDART00000020999 N/A N/A N/A 0.460±0.00 N/A N/A 2.716±0.68 2.295±1.51 N/A N/A N/A N/A N/A N/A
ENSDART00000121675 N/A N/A N/A 0.663±0.12 N/A N/A 1.122±0.20 1.822±0.00 N/A N/A 5.297±0.00 N/A N/A N/A
ENSDART00000125261 N/A N/A N/A 0.376±0.06 N/A N/A 0.656±0.34 0.720±0.19 0.038±0.00 N/A 3.084±0.00 N/A N/A N/A
ENSDARG00000026519 ENSDART00000021550 N/A N/A N/A N/A N/A N/A N/A 0.813±0.00 0.027±0.00 N/A N/A N/A N/A N/A
ENSDART00000037420 N/A N/A N/A N/A N/A N/A 3.869±0.00 N/A 0.060±0.00 N/A 0.503±0.00 N/A N/A N/A
ENSDART00000127622 N/A N/A N/A 8.024±0.00 N/A N/A 9.079±1.24 1.856±0.08 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116194 ENST00000234816 0.622±0.00 3.979±0.00 0.718±0.00 N/A 1.622±0.10 2.654±0.73 0.625±0.35 0.981±0.14 2.364±0.00 0.502±0.00 N/A 1.796±1.41 1.323±0.00 6.069±0.00
ENST00000367629 4.102±0.00 10.078±0.00 N/A 0.310±0.05 4.049±0.00 10.174±8.62 1.664±0.91 1.816±0.41 1.307±0.88 1.750±1.05 2.709±1.51 4.167±3.65 11.230±2.12 8.901±7.24
ENST00000444255 N/A N/A 4.884±0.00 N/A 6.399±0.00 N/A N/A N/A N/A N/A 3.732±0.00 N/A N/A N/A
ENSG00000228196 ENST00000423212 N/A 0.134±0.00 0.042±0.00 0.010±0.00 0.021±0.01 0.921±0.00 N/A 0.185±0.13 N/A N/A N/A 0.145±0.17 0.032±0.00 0.031±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026594 ENSMUST00000027886 N/A N/A N/A 1.361±0.00 N/A N/A N/A N/A 1.039±0.00 N/A 0.058±0.00 2.778±0.00 2.409±0.67 N/A
ENSMUST00000063199 N/A N/A N/A N/A N/A N/A N/A N/A 0.891±0.00 N/A 0.366±0.00 N/A 4.745±2.46 16.480±0.00
ENSMUST00000171292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A N/A
ENSMUST00000172057 0.289±0.00 0.615±0.14 1.263±0.00 3.130±0.66 1.932±1.13 2.523±0.60 N/A 0.914±0.36 1.685±0.53 1.795±0.16 0.080±0.03 2.201±0.85 1.129±0.18 3.572±0.00
ENSMUST00000185198 N/A N/A N/A N/A 3.119±1.26 4.179±0.00 N/A 1.098±0.00 0.842±0.00 1.533±0.19 N/A 2.717±0.61 N/A 38.032±3.08
ENSMUST00000185970 N/A 6.171±0.86 N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.137±3.80 N/A N/A
ENSMUST00000188656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.248±0.00 N/A N/A N/A
ENSMUST00000189316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189648 N/A N/A N/A 38.149±0.00 N/A N/A N/A N/A N/A N/A N/A 90.535±0.00 79.891±3.25 533.132±0.00
ENSMUST00000190648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.697±0.00 N/A N/A
ENSMUST00000190762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.073±0.01 N/A 4.591±0.52 13.597±2.37
ENSMUSG00000033544 ENSMUST00000027885 0.943±0.49 0.428±0.30 0.889±0.28 0.574±0.20 1.187±0.73 0.854±0.30 0.395±0.11 0.243±0.08 0.092±0.07 0.227±0.09 1.254±0.17 4.107±0.54 0.131±0.07 0.124±0.04
ENSMUST00000111720 0.672±0.36 2.033±1.02 0.604±0.18 0.299±0.01 0.649±0.09 0.559±0.33 0.299±0.07 0.159±0.04 0.187±0.15 0.255±0.17 N/A 2.541±0.88 0.074±0.05 0.212±0.01
ENSMUSG00000101964 ENSMUST00000189622 0.058±0.00 N/A 0.031±0.01 0.163±0.08 0.088±0.03 0.146±0.06 0.015±0.00 0.017±0.00 0.020±0.01 0.042±0.02 0.012±0.00 0.078±0.04 0.037±0.03 0.031±0.01
ENSMUST00000190758 0.450±0.10 N/A N/A N/A 0.155±0.03 N/A N/A N/A 0.182±0.10 0.160±0.03 N/A 0.652±0.20 0.335±0.00 0.493±0.00

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