C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ral GEF with PH domain and SH3 binding motif 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367635 RALGPS2-002 ENSG00000116191 9606 + 1:178725165-178920103 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartLiverLungOvaryPlacentaTestisENST00000367635
Transcript ID Adipose Bladder Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000367635 0.292±0.00 0.747±0.00 2.463±0.00 2.669±0.00 0.733±0.04 0.885±0.17 0.421±0.00 2.180±1.51 0.611±0.20 12.281±5.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WH CIL_0001WH_0002 CGP 1:178725147-178921841

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063199 Ralgps2-008 protein_coding Mus_musculus 0 2542
ENSMUST00000171292 Ralgps2-009 protein_coding Mus_musculus 0 2503
ENSMUST00000191605 Ralgps2-004 protein_coding Mus_musculus 0 2444
ENSMUST00000172057 Ralgps2-001 protein_coding Mus_musculus 0 2207
ENSMUST00000185198 Ralgps2-005 protein_coding Mus_musculus 0 2071
ENSMUST00000189316 Ralgps2-006 protein_coding Mus_musculus 0 1951
ENSMUST00000188656 Ralgps2-010 protein_coding Mus_musculus 0 1725
ENSMUST00000190648 Ralgps2-003 protein_coding Mus_musculus 0 1600
ENSMUST00000027886 Ralgps2-007 protein_coding Mus_musculus 0 1600
ENSMUST00000190762 Ralgps2-013 protein_coding Mus_musculus 0 636
ENSMUST00000189208 Ralgps2-012 retained_intron Mus_musculus 0 483
ENSMUST00000189648 Ralgps2-014 protein_coding Mus_musculus 0 353

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