C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TROVE domain family, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000116747 TROVE2 9606 + 1:193059422-193091777 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000367441 TROVE2-002 193069016-193084866 protein_coding
  ENST00000367443 TROVE2-003 193060057-193091777 protein_coding
  ENST00000367444 TROVE2-006 193060057-193091777 protein_coding
  ENST00000367445 TROVE2-005 193060057-193091777 protein_coding
  ENST00000367446 TROVE2-001 193060034-193085985 protein_coding
  ENST00000400968 TROVE2-004 193059422-193084881 protein_coding
  ENST00000415442 TROVE2-010 193059619-193075890 protein_coding
  ENST00000432079 TROVE2-008 193059454-193091219 protein_coding
  ENST00000460715 TROVE2-007 193059623-193085235 processed_transcript
  ENST00000469214 TROVE2-009 193059595-193060283 retained_intron
  ENST00000506303 TROVE2-011 193059659-193069179 protein_coding
  ENST00000512587 TROVE2-012 193069232-193075931 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367441ENST00000367446ENST00000432079ENST00000460715
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367441 N/A N/A 5.124±0.00 6.598±0.00 13.623±0.00 12.281±0.00 N/A 6.498±0.00 N/A 15.078±0.00 1.955±0.00 N/A N/A N/A
ENST00000367446 N/A N/A 2.378±0.00 N/A N/A N/A 5.061±0.00 N/A N/A N/A N/A 16.975±0.00 N/A N/A
ENST00000432079 3.584±0.00 2.402±0.00 N/A 3.888±1.71 4.584±0.38 5.270±2.05 3.839±0.00 2.542±0.67 6.775±5.60 6.253±3.41 2.541±0.00 1.498±0.19 1.288±0.63 3.436±0.68
ENST00000460715 N/A N/A 5.955±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BR CIL_0001BR_0002 CGP 1:192809039-193060080

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002520 IEA immune system development
GO:0003723 TAS:IEA RNA binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006383 TAS transcription from RNA polymerase III promoter
GO:0007224 IEA smoothened signaling pathway
GO:0009411 IEA response to UV
GO:0030529 IDA ribonucleoprotein complex
GO:0030620 IEA U2 snRNA binding
GO:0046872 IEA metal ion binding
GO:0060271 IEA cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089225 trove2 TROVE domain family, member 2 protein_coding Danio_rerio
ENSMUSG00000018199 Trove2 TROVE domain family, member 2 protein_coding Mus_musculus

Loading