C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TROVE domain family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367441 TROVE2-002 ENSG00000116747 9606 + 1:193069016-193084866 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLungMuscleENST00000367441
Transcript ID Bladder Brain Breast Colon Kidney Lung Muscle
ENST00000367441 5.124±0.00 6.598±0.00 13.623±0.00 12.281±0.00 6.498±0.00 15.078±0.00 1.955±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BR CIL_0001BR_0002 CGP 1:192809039-193060080

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 TAS:IEA RNA binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006383 TAS transcription from RNA polymerase III promoter
GO:0030529 IDA ribonucleoprotein complex
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159879 Trove2-001 protein_coding Mus_musculus 0 1692
ENSMUST00000018343 Trove2-002 retained_intron Mus_musculus 0 1234

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