C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TROVE domain family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367446 TROVE2-001 ENSG00000116747 9606 + 1:193060034-193085985 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartOvaryENST00000367446
Transcript ID Bladder Heart Ovary
ENST00000367446 2.378±0.00 5.061±0.00 16.975±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BR CIL_0001BR_0002 CGP 1:192809039-193060080

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002520 IEA immune system development
GO:0003723 TAS:IEA RNA binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006383 TAS transcription from RNA polymerase III promoter
GO:0007224 IEA smoothened signaling pathway
GO:0009411 IEA response to UV
GO:0030529 IDA ribonucleoprotein complex
GO:0030620 IEA U2 snRNA binding
GO:0046872 IEA metal ion binding
GO:0060271 IEA cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159879 Trove2-001 protein_coding Mus_musculus 0 1908
ENSMUST00000018343 Trove2-002 retained_intron Mus_musculus 0 1234

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