C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: breast carcinoma amplified sequence 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000116752 BCAS2 9606 - 1:114567557-114581639 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000369541 BCAS2-001 114567557-114581639 protein_coding
  ENST00000485021 BCAS2-002 114567884-114581629 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369541ENST00000485021
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369541 8.476±0.00 11.579±0.00 2.732±0.00 20.914±0.51 12.207±3.60 8.804±1.84 6.725±0.79 10.523±4.02 6.610±0.50 6.081±0.93 4.418±0.06 14.884±6.21 8.807±0.63 16.288±2.85
ENST00000485021 2.545±0.00 4.763±0.00 0.813±0.00 7.271±3.93 N/A 3.015±1.11 2.148±0.00 3.416±0.00 3.567±0.77 2.712±1.66 1.449±0.01 26.378±0.00 24.078±0.00 25.025±19.24

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000375 TAS RNA splicing, via transesterification reactions
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005662 IDA DNA replication factor A complex
GO:0005681 IDA spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008380 TAS RNA splicing
GO:0030054 IDA cell junction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043631 bcas2 breast carcinoma amplified sequence 2 protein_coding Danio_rerio
ENSMUSG00000005687 Bcas2 breast carcinoma amplified sequence 2 protein_coding Mus_musculus

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