C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: breast carcinoma amplified sequence 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485021 BCAS2-002 ENSG00000116752 9606 - 1:114567884-114581629 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000485021
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000485021 2.545±0.00 4.763±0.00 0.813±0.00 7.271±3.93 3.015±1.11 2.148±0.00 3.416±0.00 3.567±0.77 2.712±1.66 1.449±0.01 26.378±0.00 24.078±0.00 25.025±19.24

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135017 Bcas2-002 nonsense_mediated_decay Mus_musculus 0 508
ENSMUST00000005830 Bcas2-001 protein_coding Mus_musculus 0 508
ENSMUST00000155520 Bcas2-005 nonsense_mediated_decay Mus_musculus 0 466
ENSMUST00000139489 Bcas2-004 retained_intron Mus_musculus 0 278
ENSMUST00000147042 Bcas2-006 retained_intron Mus_musculus 0 206
ENSMUST00000136937 Bcas2-003 retained_intron Mus_musculus 0 206

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