C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: putative homeodomain transcription factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000116793 PHTF1 9606 - 1:113696831-113759489 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000357783 PHTF1-002 113703823-113759476 protein_coding
  ENST00000369598 PHTF1-011 113697205-113759338 protein_coding
  ENST00000369600 PHTF1-010 113697205-113759437 protein_coding
  ENST00000369604 PHTF1-001 113697205-113759476 protein_coding
  ENST00000393357 PHTF1-201 113697202-113759155 protein_coding
  ENST00000412670 PHTF1-004 113705765-113713328 protein_coding
  ENST00000446739 PHTF1-006 113738126-113759158 protein_coding
  ENST00000472612 PHTF1-007 113725335-113738268 processed_transcript
  ENST00000474926 PHTF1-003 113696831-113715212 processed_transcript
  ENST00000481652 PHTF1-009 113699875-113705981 processed_transcript
  ENST00000486855 PHTF1-008 113725669-113738786 processed_transcript
  ENST00000493212 PHTF1-005 113749522-113759489 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357783ENST00000369600ENST00000369604ENST00000393357ENST00000412670ENST00000474926ENST00000481652
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357783 N/A N/A 0.454±0.00 N/A N/A N/A N/A N/A N/A 0.837±0.05 N/A 1.557±0.00 N/A N/A
ENST00000369600 N/A N/A N/A N/A 1.117±0.00 0.709±0.00 0.350±0.08 1.488±0.00 N/A N/A 0.288±0.00 N/A N/A N/A
ENST00000369604 1.173±0.00 0.925±0.00 N/A 1.246±0.55 N/A N/A 0.722±0.00 N/A 0.729±0.00 1.905±0.00 0.511±0.00 1.456±0.26 2.230±0.51 17.729±6.38
ENST00000393357 N/A N/A 0.686±0.00 1.268±0.20 N/A 0.679±0.00 0.257±0.00 1.546±0.00 0.523±0.00 0.422±0.00 N/A 1.378±1.00 N/A 3.602±0.00
ENST00000412670 1.690±0.00 1.523±0.00 1.769±0.00 2.006±0.00 N/A 1.073±0.00 0.869±0.00 N/A 0.920±0.00 1.493±0.00 N/A 2.526±0.00 N/A N/A
ENST00000474926 N/A 0.687±0.00 N/A 0.823±0.01 0.462±0.00 0.307±0.07 0.259±0.00 0.643±0.00 0.341±0.00 0.457±0.00 N/A 0.589±0.20 N/A N/A
ENST00000481652 N/A 1.249±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.328±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0005801 IEA cis-Golgi network
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057708 PHTF1 putative homeodomain transcription factor 1 protein_coding Danio_rerio
ENSMUSG00000058388 Phtf1 putative homeodomain transcription factor 1 protein_coding Mus_musculus

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