C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: putative homeodomain transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369604 PHTF1-001 ENSG00000116793 9606 - 1:113697205-113759476 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainHeartLiverLungMuscleOvaryPlacentaTestisENST00000369604
Transcript ID Adipose Adrenal Brain Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000369604 1.173±0.00 0.925±0.00 1.246±0.55 0.722±0.00 0.729±0.00 1.905±0.00 0.511±0.00 1.456±0.26 2.230±0.51 17.729±6.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0005801 IEA cis-Golgi network
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000145727 Phtf1-004 nonsense_mediated_decay Mus_musculus 0 3225
ENSMUST00000063717 Phtf1-001 protein_coding Mus_musculus 0 3223
ENSMUST00000117150 Phtf1-002 protein_coding Mus_musculus 0 3109
ENSMUST00000055425 Phtf1-003 protein_coding Mus_musculus 0 2628
ENSMUST00000150090 Phtf1-005 retained_intron Mus_musculus 0 2333
ENSMUST00000090685 Phtf1-007 protein_coding Mus_musculus 0 2259
ENSMUST00000123611 Phtf1-010 protein_coding Mus_musculus 0 961
ENSMUST00000150849 Phtf1-008 nonsense_mediated_decay Mus_musculus 0 944
ENSMUST00000156262 Phtf1-009 protein_coding Mus_musculus 0 374
ENSMUST00000130385 Phtf1-006 retained_intron Mus_musculus 0 326

Loading