C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: putative homeodomain transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393357 PHTF1-201 ENSG00000116793 9606 - 1:113697202-113759155 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungOvaryTestisENST00000393357
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Ovary Testis
ENST00000393357 0.686±0.00 1.268±0.20 0.679±0.00 0.257±0.00 1.546±0.00 0.523±0.00 0.422±0.00 1.378±1.00 3.602±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000145727 Phtf1-004 nonsense_mediated_decay Mus_musculus 0 3116
ENSMUST00000063717 Phtf1-001 protein_coding Mus_musculus 0 3110
ENSMUST00000117150 Phtf1-002 protein_coding Mus_musculus 0 3109
ENSMUST00000055425 Phtf1-003 protein_coding Mus_musculus 0 2628
ENSMUST00000090685 Phtf1-007 protein_coding Mus_musculus 0 2259
ENSMUST00000150090 Phtf1-005 retained_intron Mus_musculus 0 2220
ENSMUST00000123611 Phtf1-010 protein_coding Mus_musculus 0 961
ENSMUST00000150849 Phtf1-008 nonsense_mediated_decay Mus_musculus 0 944
ENSMUST00000156262 Phtf1-009 protein_coding Mus_musculus 0 374
ENSMUST00000130385 Phtf1-006 retained_intron Mus_musculus 0 326

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