C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retinoblastoma binding protein 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000117222 RBBP5 9606 - 1:205086142-205122015 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264515 RBBP5-001 205086142-205122015 protein_coding
  ENST00000367164 RBBP5-002 205086142-205122015 protein_coding
  ENST00000484379 RBBP5-003 205105087-205121966 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264515ENST00000367164
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264515 3.441±0.00 N/A N/A 3.651±0.67 2.827±0.15 2.491±0.77 0.905±0.47 3.172±0.10 2.454±0.59 3.235±1.16 3.299±2.61 2.772±0.90 2.095±0.10 4.323±1.35
ENST00000367164 0.425±0.00 1.511±0.00 0.945±0.00 0.398±0.00 1.216±0.05 1.448±0.00 1.368±0.00 2.303±0.00 1.693±0.00 N/A 0.671±0.00 1.614±0.77 1.653±0.96 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0035064 IDA methylated histone binding
GO:0035097 IPI histone methyltransferase complex
GO:0042800 IDA histone methyltransferase activity (H3-K4 specific)
GO:0043627 IDA response to estrogen
GO:0044212 IDA transcription regulatory region DNA binding
GO:0048188 IDA Set1C/COMPASS complex
GO:0051568 IDA histone H3-K4 methylation
GO:0071339 IDA MLL1 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042147 rbbp5 retinoblastoma binding protein 5 protein_coding Danio_rerio
ENSMUSG00000026439 Rbbp5 retinoblastoma binding protein 5 protein_coding Mus_musculus

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