C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ERI1 exoribonuclease family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000117419 ERI3 9606 - 1:44221070-44355260 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372257 ERI3-001 44221070-44355208 protein_coding
  ENST00000372259 ERI3-003 44221070-44323043 protein_coding
  ENST00000452396 ERI3-004 44247986-44355260 protein_coding
  ENST00000456170 ERI3-006 44221070-44319750 protein_coding
  ENST00000457571 ERI3-002 44308310-44355249 protein_coding
  ENST00000462341 ERI3-009 44221593-44256921 processed_transcript
  ENST00000479101 ERI3-007 44221504-44248002 processed_transcript
  ENST00000489710 ERI3-008 44221429-44247966 processed_transcript
  ENST00000495828 ERI3-005 44284830-44355238 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372257ENST00000372259ENST00000456170ENST00000457571ENST00000495828
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372257 4.834±0.00 N/A N/A 28.231±15.83 8.510±6.35 11.867±0.00 7.023±0.00 9.465±0.00 6.794±4.60 5.599±0.00 22.544±0.00 12.757±7.14 26.673±5.38 46.492±14.25
ENST00000372259 N/A N/A N/A N/A N/A 0.722±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456170 N/A 4.570±0.00 N/A N/A 6.179±0.00 2.660±0.00 N/A N/A 5.686±0.00 N/A 8.123±0.00 14.041±0.00 18.858±3.15 9.674±0.00
ENST00000457571 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.398±0.00 N/A 1.284±0.00 N/A N/A
ENST00000495828 N/A N/A 1.593±0.00 N/A N/A 1.491±0.00 N/A N/A N/A N/A N/A 1.911±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B8 CIL_0009B8_0001 VISTA 1:43734711-44337665
CIL_0008SF CIL_0008SF_0001 VISTA 1:43949748-44550457

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004527 IEA exonuclease activity
GO:0005515 IEA protein binding
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000033423 Eri3 exoribonuclease 3 protein_coding Mus_musculus

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