C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ERI1 exoribonuclease family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372257 ERI3-001 ENSG00000117419 9606 - 1:44221070-44355208 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372257
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372257 4.834±0.00 28.231±15.83 8.510±6.35 11.867±0.00 7.023±0.00 9.465±0.00 6.794±4.60 5.599±0.00 22.544±0.00 12.757±7.14 26.673±5.38 46.492±14.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B8 CIL_0009B8_0001 VISTA 1:43734711-44337665
CIL_0008SF CIL_0008SF_0001 VISTA 1:43949748-44550457

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004527 IEA exonuclease activity
GO:0005515 IEA protein binding
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037127 Eri3-001 protein_coding Mus_musculus 0 2263
ENSMUST00000146384 Eri3-006 processed_transcript Mus_musculus 0 1110
ENSMUST00000134379 Eri3-004 processed_transcript Mus_musculus 0 771
ENSMUST00000144373 Eri3-005 protein_coding Mus_musculus 0 706
ENSMUST00000125312 Eri3-002 protein_coding Mus_musculus 0 385
ENSMUST00000134453 Eri3-003 processed_transcript Mus_musculus 0 342

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