C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: exoribonuclease 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033423 Eri3 10090 + 4:117550365-117674297 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037127 Eri3-001 117550365-117674297 protein_coding
  ENSMUST00000125312 Eri3-002 117582687-117615582 protein_coding
  ENSMUST00000134379 Eri3-004 117637338-117674281 processed_transcript
  ENSMUST00000134453 Eri3-003 117589078-117615241 processed_transcript
  ENSMUST00000144373 Eri3-005 117552610-117582717 protein_coding
  ENSMUST00000146384 Eri3-006 117564758-117674297 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037127ENSMUST00000134379ENSMUST00000146384
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037127 34.695±2.99 35.119±7.71 37.351±9.34 53.334±29.52 22.535±4.39 19.628±2.22 26.028±1.15 23.469±2.08 15.535±5.09 22.103±1.32 42.660±4.08 33.763±11.66 14.234±5.31 20.939±9.51
ENSMUST00000134379 N/A 36.384±3.97 N/A N/A 18.942±2.14 12.149±2.20 N/A N/A N/A 8.836±0.00 N/A 33.548±7.75 N/A N/A
ENSMUST00000146384 11.887±4.11 N/A N/A N/A 12.545±7.17 14.659±2.06 7.779±0.00 11.736±7.20 5.956±1.47 12.075±2.60 N/A 18.143±8.25 N/A 10.914±3.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093U CIL_00093U_0002 VISTA 4:117090982-117692314
CIL_0008SF CIL_0008SF_0002 VISTA 4:117346906-117947610
CIL_0007OR CIL_0007OR_0002 UCNEbase 4:117349630-117647360
CIL_0009B8 CIL_0009B8_0002 VISTA 4:117528714-118131599

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004527 IEA exonuclease activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000117419 ERI3 ERI1 exoribonuclease family member 3 protein_coding Homo_sapiens

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