C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ERI1 exoribonuclease family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000456170 ERI3-006 ENSG00000117419 9606 - 1:44221070-44319750 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverMuscleOvaryPlacentaTestisENST00000456170
Transcript ID Adrenal Breast Colon Liver Muscle Ovary Placenta Testis
ENST00000456170 4.570±0.00 6.179±0.00 2.660±0.00 5.686±0.00 8.123±0.00 14.041±0.00 18.858±3.15 9.674±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B8 CIL_0009B8_0001 VISTA 1:43734711-44337665
CIL_0008SF CIL_0008SF_0001 VISTA 1:43949748-44550457

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004527 IEA exonuclease activity
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146384 Eri3-006 processed_transcript Mus_musculus 0 774
ENSMUST00000037127 Eri3-001 protein_coding Mus_musculus 0 774
ENSMUST00000134379 Eri3-004 processed_transcript Mus_musculus 0 771
ENSMUST00000125312 Eri3-002 protein_coding Mus_musculus 0 385
ENSMUST00000134453 Eri3-003 processed_transcript Mus_musculus 0 342
ENSMUST00000144373 Eri3-005 protein_coding Mus_musculus 1.96182e-44 183

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