C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 146
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118518 RNF146 9606 + 6:127266610-127288567 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309649 RNF146-201 127266738-127288554 protein_coding
  ENST00000356799 RNF146-002 127266849-127288567 protein_coding
  ENST00000368314 RNF146-001 127266610-127288558 protein_coding
  ENST00000476956 RNF146-005 127266726-127286891 protein_coding
  ENST00000477776 RNF146-003 127266864-127286849 protein_coding
  ENST00000480444 RNF146-006 127266888-127286903 protein_coding
  ENST00000489534 RNF146-004 127266883-127286953 processed_transcript
  ENST00000495188 RNF146-007 127266851-127280748 retained_intron
  ENST00000608340 RNF146-010 127266883-127286097 processed_transcript
  ENST00000608991 RNF146-011 127266883-127288362 protein_coding
  ENST00000609447 RNF146-009 127266840-127286351 protein_coding
  ENST00000609944 RNF146-013 127266872-127286084 protein_coding
  ENST00000610153 RNF146-008 127266883-127288362 protein_coding
  ENST00000610162 RNF146-012 127266883-127286643 protein_coding
  ENST00000616343 RNF146-202 127266682-127288554 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309649ENST00000356799ENST00000368314ENST00000608991ENST00000610153ENST00000616343
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309649 N/A N/A N/A N/A N/A N/A 2.055±1.43 N/A N/A N/A N/A N/A N/A N/A
ENST00000356799 N/A 2.338±0.00 N/A 1.655±0.00 N/A N/A 3.575±0.00 1.084±0.42 1.362±0.00 N/A 1.742±0.00 2.648±0.46 3.558±1.58 9.793±0.00
ENST00000368314 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.063±0.00 N/A N/A N/A N/A
ENST00000608991 6.356±0.00 3.866±0.00 N/A 7.728±0.00 2.717±0.50 1.169±0.00 N/A 2.863±0.00 N/A 2.046±0.00 1.746±0.00 6.581±3.46 4.911±0.00 6.751±2.98
ENST00000610153 8.868±0.00 7.148±0.00 1.357±0.00 5.842±4.06 8.088±0.00 9.939±8.32 14.725±0.00 10.007±0.00 3.922±2.02 15.955±0.00 11.212±0.00 8.955±4.08 8.282±1.57 16.187±6.34
ENST00000616343 N/A N/A 1.367±0.00 6.470±0.00 N/A N/A N/A 0.420±0.00 4.566±0.00 1.775±0.00 N/A 2.676±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005829 IDA cytosol
GO:0008270 IEA zinc ion binding
GO:0016055 IEA Wnt signaling pathway
GO:0016874 IEA ligase activity
GO:0042787 IMP protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0051865 IDA protein autoubiquitination
GO:0070936 IMP protein K48-linked ubiquitination
GO:0072572 IDA poly-ADP-D-ribose binding
GO:0090263 IMP positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089981 rnf146 ring finger protein 146 protein_coding Danio_rerio
ENSMUSG00000038876 Rnf146 ring finger protein 146 protein_coding Mus_musculus

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