C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 146
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038876 Rnf146 10090 - 10:29344178-29362442 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037548 Rnf146-201 29344178-29362442 protein_coding
  ENSMUST00000160144 Rnf146-001 29346171-29362442 protein_coding
  ENSMUST00000160372 Rnf146-002 29346176-29362040 protein_coding
  ENSMUST00000161508 Rnf146-004 29347219-29362023 protein_coding
  ENSMUST00000162335 Rnf146-003 29346658-29357713 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037548ENSMUST00000160144ENSMUST00000160372ENSMUST00000161508ENSMUST00000162335
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037548 10.149±0.00 2.560±0.68 6.978±2.72 4.117±0.62 12.074±0.00 1.335±0.09 2.526±0.16 5.493±1.68 5.492±2.98 3.828±0.58 1.867±0.34 4.539±4.09 4.567±2.38 5.507±0.00
ENSMUST00000160144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.186±0.00
ENSMUST00000160372 N/A N/A 11.877±1.64 10.939±3.97 N/A 3.282±0.54 5.688±1.70 5.183±0.21 6.443±1.35 5.841±1.96 5.498±1.54 4.417±1.02 7.205±3.18 N/A
ENSMUST00000161508 N/A N/A N/A 31.728±0.00 N/A N/A N/A N/A N/A N/A N/A 37.069±0.00 22.860±4.99 31.044±0.00
ENSMUST00000162335 10.757±2.33 11.311±3.44 15.244±0.00 14.021±0.40 10.779±1.37 8.731±2.59 7.780±1.89 10.955±2.44 8.728±1.62 13.398±1.83 5.639±1.19 17.196±3.68 5.838±0.45 20.970±2.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065S CIL_00065S_0002 CGP 10:29211643-29346661

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005634 IEA nucleus
GO:0005829 ISS cytosol
GO:0008270 IEA zinc ion binding
GO:0016055 IEA Wnt signaling pathway
GO:0016874 IEA ligase activity
GO:0042787 ISS protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0051865 ISS protein autoubiquitination
GO:0070936 ISS protein K48-linked ubiquitination
GO:0072572 ISS poly-ADP-D-ribose binding
GO:0090263 ISS positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089981 rnf146 ring finger protein 146 protein_coding Danio_rerio
ENSG00000118518 RNF146 ring finger protein 146 protein_coding Homo_sapiens

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